RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 GEMIN8Q9NWZ8 242 aaKnown RBP4.48□□□□□ -1.69
LINC01088-211ENST00000515597 ICKQ9UPZ9 632 aa4.48□□□□□ -1.69
LINC01088-211ENST00000515597 DTNAQ9Y4J8 743 aa4.48□□□□□ -1.69
LINC01088-211ENST00000515597 EMSYQ7Z589 1322 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 ZNF335Q9H4Z2 1342 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 RASA4BC9J798 803 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 RASA4O43374 803 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 AKR1A1P14550 325 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 EEF1GP26641 437 aaKnown RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 TNFRSF8P28908 595 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 SLC8A1P32418 973 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 P2RX3P56373 397 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 MSANTD2Q6P1R3 559 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 ZNF474Q6S9Z5 364 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 C16orf89Q6UX73 402 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 CCAR1Q8IX12 1150 aaKnown RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 ADGRF4Q8IZF3 695 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 SLC44A5Q8NCS7 719 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 ZFPM2Q8WW38 1151 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 RIPOR3Q96MK2 946 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 PPP1R10Q96QC0 940 aaKnown RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 EIF3CQ99613 913 aaKnown RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 ERVK-5Q9HDB9 667 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 NECTIN3Q9NQS3 549 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 TM7SF3Q9NS93 570 aa4.47□□□□□ -1.69
LINC01088-211ENST00000515597 AGO2Q9UKV8 859 aaKnown RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 UBE2J1Q9Y385 318 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-211ENST00000515597 UNC13AQ9UPW8 1703 aa4.46□□□□□ -1.69
LINC01088-211ENST00000515597 NPC1O15118 1278 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 SRGAP2BP0DMP2 458 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 ARRB2P32121 409 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 GNALP38405 381 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 HYAL1Q12794 435 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 CSHL1Q14406 222 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 PTGR1Q14914 329 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 RHPN2Q8IUC4 686 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 RASGRP3Q8IV61 690 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 OR2C3Q8N628 320 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 NPIPB3Q92617 1050 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 KAT2BQ92831 832 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 PIMREGQ9BSJ6 248 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 TRIM2Q9C040 744 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 FSCN3Q9NQT6 498 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 HELLSQ9NRZ9 838 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 ANAPC4Q9UJX5 808 aa4.46□□□□□ -1.7
LINC01088-211ENST00000515597 RB1CC1Q8TDY2 1594 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 J3KTA2 159 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 PODXLO00592 558 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 HNRNPDLO14979 420 aaKnown RBP4.45□□□□□ -1.7
LINC01088-211ENST00000515597 PRPF4O43172 522 aaKnown RBP eCLIP4.45□□□□□ -1.7
LINC01088-211ENST00000515597 ZC3H11AO75152 810 aaKnown RBP eCLIP4.45□□□□□ -1.72e-6■□□□□ 8.9
LINC01088-211ENST00000515597 TAF5LO75529 589 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 NTSR2O95665 410 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 GLP2RO95838 553 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 MYL3P08590 195 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 ITGA5P08648 1049 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 HOXA11P31270 313 aaPredicted RBP4.45□□□□□ -1.7
LINC01088-211ENST00000515597 PGGT1BP53609 377 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 CBFBQ13951 182 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 P3H1Q32P28 736 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 ANXA2RQ3ZCQ2 193 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 CCDC181Q5TID7 509 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 IZUMO3Q5VZ72 239 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 ARL6IP4Q66PJ3 421 aaKnown RBP4.45□□□□□ -1.7
LINC01088-211ENST00000515597 FBXO38Q6PIJ6 1188 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 DHRS13Q6UX07 377 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 KRT27Q7Z3Y8 459 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 ARL14EPQ8N8R7 260 aaPredicted RBP4.45□□□□□ -1.7
LINC01088-211ENST00000515597 ZNF566Q969W8 418 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 MYLK2Q9H1R3 596 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 THSD1Q9NS62 852 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 B3GNT3Q9Y2A9 372 aa4.45□□□□□ -1.7
LINC01088-211ENST00000515597 CCDC180Q9P1Z9 1646 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 KIR2DS5A0A0G2JLQ3 304 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 PNMA6EA0A0J9YXQ4 647 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 KIR2DS3K7RE56 304 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 PCDH17O14917 1159 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 ATG13O75143 517 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 PPP6R2O75170 966 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 RFPL3SP0C7P2 107 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 POLD2P49005 469 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 PGM5Q15124 567 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 ASIC2Q16515 512 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 LONRF1Q17RB8 773 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 MPEG1Q2M385 716 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 ZNF628Q5EBL2 1059 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 LIPMQ5VYY2 423 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 ZNF324BQ6AW86 544 aaPredicted RBP4.44□□□□□ -1.7
LINC01088-211ENST00000515597 TTC30AQ86WT1 665 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 FBXL14Q8N1E6 418 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 ZBTB8BQ8NAP8 495 aaPredicted RBP4.44□□□□□ -1.7
LINC01088-211ENST00000515597 SLC22A17Q8WUG5 538 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 MIB2Q96AX9 1013 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 EME1Q96AY2 570 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 FAR2Q96K12 515 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 GPR78Q96P69 363 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 AAMDCQ9H7C9 122 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms