RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 MAN2A1Q16706 1144 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 HDDC3Q8N4P3 179 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 FIBINQ8TAL6 211 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 WFDC5Q8TCV5 224 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 NOX5Q96PH1 765 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 GTPBP2Q9BX10 602 aaKnown RBP18.14■□□□□ 0.49
DDX41-217ENST00000515562 ACP6Q9NPH0 428 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 KCNJ18B7U540 433 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 ARHGAP33O14559 1287 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 MOCS2O96007 188 aaPredicted RBP18.13■□□□□ 0.49
DDX41-217ENST00000515562 IGLV3-25P01717 112 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 C7P10643 843 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 HLA-EP13747 358 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 CD70P32970 193 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 PTK2Q05397 1052 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 ZBTB16Q05516 673 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 ZNF252P-AS1Q0IIN9 211 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 CDH18Q13634 790 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 PTPRNQ16849 979 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 PLEKHG6Q3KR16 790 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 SYPL2Q5VXT5 272 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 CACUL1Q86Y37 369 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 BTN2A3PQ96KV6 586 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 NUP58Q9BVL2 599 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 GPR174Q9BXC1 333 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 NUCKS1Q9H1E3 243 aaKnown RBP18.13■□□□□ 0.49
DDX41-217ENST00000515562 PCED1AQ9H1Q7 454 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 SLC32A1Q9H598 525 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 STIM2Q9P246 746 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 TJP2Q9UDY2 1190 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 PCDHGC3Q9UN70 934 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 GON4LQ3T8J9 2241 aa18.13■□□□□ 0.49
DDX41-217ENST00000515562 ACACBO00763 2458 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 UPK3BL1B0FP48 263 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 UPK3BL2E5RIL1 263 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 GIPC1O14908 333 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 OPHN1O60890 802 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 TRUB2O95900 331 aaKnown RBP18.12■□□□□ 0.49
DDX41-217ENST00000515562 ASLP04424 464 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 GLI1P08151 1106 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 PRKCSHP14314 528 aaPredicted RBP18.12■□□□□ 0.49
DDX41-217ENST00000515562 ERCC5P28715 1186 aaPredicted RBP18.12■□□□□ 0.49
DDX41-217ENST00000515562 SNX16P57768 344 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 RPS24P62847 133 aaKnown RBP18.12■□□□□ 0.49
DDX41-217ENST00000515562 APBA1Q02410 837 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 DPCR1Q3MIW9 517 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 MINDY1Q8N5J2 469 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 DNASE2BQ8WZ79 361 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 LMLNQ96KR4 655 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 LHX5Q9H2C1 402 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 FSCN3Q9NQT6 498 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 ASNSD1Q9NWL6 643 aa18.12■□□□□ 0.49
DDX41-217ENST00000515562 TPRP12270 2363 aaKnown RBP18.11■□□□□ 0.49
DDX41-217ENST00000515562 A0A1B0GTW7 788 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 HSF2BPO75031 334 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 LUC7L3O95232 432 aaKnown RBP18.11■□□□□ 0.49
DDX41-217ENST00000515562 SLC2A3P11169 496 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 ST8SIA6P61647 398 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 SEMA3BQ13214 749 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 TTC31Q49AM3 519 aaPredicted RBP18.11■□□□□ 0.49
DDX41-217ENST00000515562 DCAF6Q58WW2 860 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 EFHC1Q5JVL4 640 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 CHSY1Q86X52 802 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 CARNMT1Q8N4J0 409 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 ZNF366Q8N895 744 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 ATP6V0D2Q8N8Y2 350 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 DEFB124Q8NES8 71 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 TTC17Q96AE7 1141 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 PPP1R13BQ96KQ4 1090 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 CPXM1Q96SM3 734 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 ZDHHC5Q9C0B5 715 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 NDST4Q9H3R1 872 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 FAM204AQ9H8W3 233 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 SIX2Q9NPC8 291 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 SUN2Q9UH99 717 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 SLC12A6Q9UHW9 1150 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 CEP83Q9Y592 693 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 ADAMTS9Q9P2N4 1935 aa18.11■□□□□ 0.49
DDX41-217ENST00000515562 ASCC3Q8N3C0 2202 aaKnown RBP18.1■□□□□ 0.49
DDX41-217ENST00000515562 METTL12A8MUP2 240 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 MOCS3O95396 460 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 DNTTP04053 509 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 KRT9P35527 623 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 CSKP41240 450 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 CDK17Q00537 523 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 MTA1Q13330 715 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 VWA3BQ502W6 1294 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 ZC3H12AQ5D1E8 599 aaKnown RBP18.1■□□□□ 0.49
DDX41-217ENST00000515562 DCAF12L1Q5VU92 463 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 ZNF776Q68DI1 518 aaPredicted RBP18.1■□□□□ 0.49
DDX41-217ENST00000515562 PASD1Q8IV76 773 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 LGI2Q8N0V4 545 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 KDM1BQ8NB78 822 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 MYEOVQ96EZ4 313 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 SLC2A13Q96QE2 648 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 TUBGCP2Q9BSJ2 902 aa18.1■□□□□ 0.49
DDX41-217ENST00000515562 PRSS16Q9NQE7 514 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms