RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	DKK4	Q9UBT3	224 aa		5.23	□□□□□ -1.57
RUFY3-215	ENST00000515479	SLC27A6	Q9Y2P4	619 aa		5.23	□□□□□ -1.57
RUFY3-215	ENST00000515479	WDR90	Q96KV7	1748 aa		5.23	□□□□□ -1.57
RUFY3-215	ENST00000515479	SSH2	Q76I76	1423 aa		5.23	□□□□□ -1.57
RUFY3-215	ENST00000515479	ZBED9	Q6R2W3	1325 aa		5.23	□□□□□ -1.57
RUFY3-215	ENST00000515479	ATP7B	P35670	1465 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	KIAA0232	Q92628	1395 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	INPPL1	O15357	1258 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	CA12	O43570	354 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	PRAMEF2	O60811	474 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	CRYAB	P02511	175 aa	Known RBP	5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	RBL1	P28749	1068 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	CPA2	P48052	419 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	STIM1	Q13586	685 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	POLD3	Q15054	466 aa	Predicted RBP	5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	RNF220	Q5VTB9	566 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	PLAG1	Q6DJT9	500 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	PPP4R4	Q6NUP7	873 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	MZT2A	Q6P582	158 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	ZNF793	Q6ZN11	406 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	CCDC149	Q6ZUS6	474 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	UNC13D	Q70J99	1090 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	SESTD1	Q86VW0	696 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	P3H2	Q8IVL5	708 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	FAM71D	Q8N9W8	422 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	APIP	Q96GX9	242 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	ZFYVE19	Q96K21	471 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	ADGRE3	Q9BY15	652 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	ARL8B	Q9NVJ2	186 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	VPS51	Q9UID3	782 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	FZD4	Q9ULV1	537 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	PEAK1	Q9H792	1746 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	CNTNAP2	Q9UHC6	1331 aa		5.22	□□□□□ -1.57
RUFY3-215	ENST00000515479	WNK3	Q9BYP7	1800 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	INSR	P06213	1382 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	CCDC187	A0A096LP49	1063 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	MGEA5	O60502	916 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	TULP3	O75386	442 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	MYF5	P13349	255 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	BTF3	P20290	206 aa	Known RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	CCDC15	Q0P6D6	951 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	CLCA4	Q14CN2	919 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	PPP2R5A	Q15172	486 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	CCDC184	Q52MB2	194 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	COLCA1	Q6ZS62	124 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM177A1	Q8N128	213 aa	Predicted RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	FSTL5	Q8N475	847 aa	Predicted RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM156A	Q8NDB6	213 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	MARK4	Q96L34	752 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	CINP	Q9BW66	212 aa	Predicted RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	NUAK2	Q9H093	628 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	DDX20	Q9UHI6	824 aa	Known RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	HPSE	Q9Y251	543 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	BCL9	O00512	1426 aa		5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	SMG6	Q86US8	1419 aa	Known RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	YTHDC2	Q9H6S0	1430 aa	Known RBP	5.21	□□□□□ -1.58
RUFY3-215	ENST00000515479	COL24A1	Q17RW2	1714 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	LRRC37A3	O60309	1634 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	BRD4	O60885	1362 aa	Predicted RBP	5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479		B4DGG1	531 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	TOMM70	O94826	608 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	ALPL	P05186	524 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	CD63	P08962	238 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	TMEM225B	P0DP42	221 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	HTR6	P50406	440 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	JAK3	P52333	1124 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	COPA	P53621	1224 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	MTX1	Q13505	466 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM110C	Q1W6H9	321 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	KIAA0753	Q2KHM9	967 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	MIDN	Q504T8	468 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	MANEAL	Q5VSG8	457 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	KIAA1161	Q6NSJ0	714 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	DARS2	Q6PI48	645 aa	Known RBP	5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	MAGEB6	Q8N7X4	407 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	IGFBPL1	Q8WX77	278 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	SCNM1	Q9BWG6	230 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	BRIP1	Q9BX63	1249 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	FAM234A	Q9H0X4	552 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	ZNF212	Q9UDV6	495 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	CRB1	P82279	1406 aa		5.2	□□□□□ -1.58
RUFY3-215	ENST00000515479	TULP4	Q9NRJ4	1543 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	GOLIM4	O00461	696 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	TOMM40	O96008	361 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	GALNS	P34059	522 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	THBS3	P49746	956 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	NXN	Q6DKJ4	435 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	GRHL2	Q6ISB3	625 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	C9orf47	Q6ZRZ4	202 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	UBE2Q1	Q7Z7E8	422 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	TCEAL8	Q8IYN2	117 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	MPLKIP	Q8TAP9	179 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	ZDHHC12	Q96GR4	267 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	TM2D2	Q9BX73	214 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	PIK3C2G	O75747	1445 aa		5.19	□□□□□ -1.58
RUFY3-215	ENST00000515479	NHS	Q6T4R5	1651 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	LMO7	Q8WWI1	1683 aa		5.18	□□□□□ -1.58
RUFY3-215	ENST00000515479	CPD	O75976	1380 aa		5.18	□□□□□ -1.58

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