RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 COG8Q96MW5 612 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 RIT2Q99578 217 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 TUBA1CQ9BQE3 449 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 CDH19Q9H159 772 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 CYP26B1Q9NR63 512 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PCDHB12Q9Y5F1 795 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 TRIM38O00635 465 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 YBX3P16989 372 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 MAGEA6P43360 314 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 BMXP51813 675 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 GRSF1Q12849 480 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PEX6Q13608 980 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PCLAFQ15004 111 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 MROH9Q5TGP6 573 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 C4orf22Q6V702 233 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 CYP2U1Q7Z449 544 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 CPSF7Q8N684 471 aaKnown RBP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 MCUQ8NE86 351 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 NSMCE3Q96MG7 304 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF577Q9BSK1 485 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PI4K2AQ9BTU6 479 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 EFHD1Q9BUP0 239 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF518BQ9C0D4 1074 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ARMC7Q9H6L4 198 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 MAN1C1Q9NR34 630 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 EMCNQ9ULC0 261 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 TMEM114B3SHH9 223 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 H2AFYO75367 372 aaKnown RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 TADA2AO75478 443 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 CSH1P0DML2 217 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 CSH2P0DML3 217 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 RALBP11234 206 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 MX2P20592 715 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 GSSP48637 474 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 PCYT1AP49585 367 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 MS4A2Q01362 244 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 MTM1Q13496 603 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 PDE1CQ14123 709 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 NRF1Q16656 503 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 TXNRD3NBQ6F5E7 133 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 ANKRD26P1Q6NSI1 321 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 SNX32Q86XE0 403 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 RFX6Q8HWS3 928 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 SLC7A3Q8WY07 619 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 POMGNT1Q8WZA1 660 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 CLIP3Q96DZ5 547 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 ZNF641Q96N77 438 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 UHRF1Q96T88 793 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 NPLQ9BXD5 320 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 COG4Q9H9E3 785 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 EFCAB1Q9HAE3 211 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 ANLNQ9NQW6 1124 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
SMAD1-215ENST00000515385 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
SMAD1-215ENST00000515385 HMX2A2RU54 273 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 FAM47E-STBD1D6RA91 191 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GNPATO15228 680 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SLC16A4O15374 487 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 HTRA2O43464 458 aaPredicted RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 PPIL2Q13356 520 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 NAB1Q13506 487 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 ART3Q13508 389 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 CUL2Q13617 745 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 ABCB5Q2M3G0 1257 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 DARS2Q6PI48 645 aaKnown RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TTC33Q6PID6 262 aaPredicted RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TTC30AQ86WT1 665 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 GPD1LQ8N335 351 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TAMM41Q96BW9 452 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 KLHL32Q96NJ5 620 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 CTRCQ99895 268 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 MROQ9BYG7 248 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 RIC8BQ9NVN3 520 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SUCOQ9UBS9 1254 aaKnown RBP13.12□□□□□ -0.31
SMAD1-215ENST00000515385 CDC14AQ9UNH5 594 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
SMAD1-215ENST00000515385 SCN4AP35499 1836 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms