RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 BUD31P41223 144 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 PCP4P48539 62 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 COPB1P53618 953 aaKnown RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 FHL2Q14192 279 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 ZNF169Q14929 603 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 ACOX1Q15067 660 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TAF5Q15542 800 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 BTBD16Q32M84 506 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 CERKLQ49MI3 558 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3GQ6DHY5 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3CQ6IPX1 549 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 NFRKBQ6P4R8 1299 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TMEM65Q6PI78 240 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 CRIP3Q6Q6R5 217 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 KIRREL2Q6UWL6 708 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 LDHAL6AQ6ZMR3 332 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D3Q8IZP1 549 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 METTL25Q8N6Q8 603 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 PNPLA1Q8N8W4 532 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 LARP4BQ92615 738 aaKnown RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 RSC1A1Q92681 617 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 TBC1D20Q96BZ9 403 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 GCC1Q96CN9 775 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 ADGRE3Q9BY15 652 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 CIPCQ9C0C6 399 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 LIN7CQ9NUP9 197 aaKnown RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 DLL3Q9NYJ7 618 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 NDUFAF4Q9P032 175 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 LUZP4Q9P127 313 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 MAFFQ9ULX9 164 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 GTF2A1LQ9UNN4 478 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 C19orf53Q9UNZ5 99 aaPredicted RBP4.75□□□□□ -1.65
HTT-210ENST00000512909 TULP4Q9NRJ4 1543 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 LAMC1P11047 1609 aa4.75□□□□□ -1.65
HTT-210ENST00000512909 SPATA31A1Q5TZJ5 1347 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 TTC21AQ8NDW8 1320 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 SHPRHQ149N8 1683 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 RGS12O14924 1447 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 ATRNO75882 1429 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 OR2W5A6NFC9 320 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 VWC2LB2RUY7 222 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 H0YIZ8 118 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 RNF8O76064 485 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 PDE8BO95263 885 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 FSHBP01225 129 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 FGAP02671 866 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 HNRNPCP07910 306 aaKnown RBP eCLIP4.74□□□□□ -1.65
HTT-210ENST00000512909 HSPA5P11021 654 aaKnown RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 MATN1P21941 496 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 KLRK1P26718 216 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 CTGFP29279 349 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 GRK5P34947 590 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 THBS4P35443 961 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 IGHMBP2P38935 993 aaKnown RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 RBM5P52756 815 aaKnown RBP eCLIP4.74□□□□□ -1.65
HTT-210ENST00000512909 SOX10P56693 466 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 ZXDAP98168 799 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 SF3A3Q12874 501 aaKnown RBP eCLIP4.74□□□□□ -1.65
HTT-210ENST00000512909 GRM4Q14833 912 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 TBRG1Q3YBR2 411 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 TUBB8Q3ZCM7 444 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 KIAA0895LQ68EN5 471 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 VSTM1Q6UX27 236 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 RRAGAQ7L523 313 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 TRABD2AQ86V40 505 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 C2CD5Q86YS7 1000 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 FTSJ3Q8IY81 847 aaKnown RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 SRFBP1Q8NEF9 429 aaKnown RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 OR6Y1Q8NGX8 325 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 FYTTD1Q96QD9 318 aaKnown RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 TRIM2Q9C040 744 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 TMLHEQ9NVH6 421 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 SYBUQ9NX95 663 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 SUFUQ9UMX1 484 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 PCDHB2Q9Y5E7 798 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 WNT6Q9Y6F9 365 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 EPN1Q9Y6I3 576 aaPredicted RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 NHSL1Q5SYE7 1610 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 POLR3AO14802 1390 aaPredicted RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 SETD1AO15047 1707 aaKnown RBP4.74□□□□□ -1.65
HTT-210ENST00000512909 FMN2Q9NZ56 1722 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 IFT172Q9UG01 1749 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 RALGAPBQ86X10 1494 aa4.74□□□□□ -1.65
HTT-210ENST00000512909 CCDC189A1A4V9 331 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 WDR27A2RRH5 827 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 KIF28PB7ZC32 967 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 PCDH17O14917 1159 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 SEPT4O43236 478 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 CA12O43570 354 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 JTBO76095 146 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 CER1O95813 267 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 ERBB2P04626 1255 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 TMIGD3P0DMS9 266 aaPredicted RBP4.73□□□□□ -1.65
HTT-210ENST00000512909 RXRAP19793 462 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 SERPINA4P29622 427 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 JAK3P52333 1124 aa4.73□□□□□ -1.65
HTT-210ENST00000512909 INHBCP55103 352 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms