RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 MYCBPAPQ8TBZ2 947 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 MYLPFQ96A32 169 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 TRMT2BQ96GJ1 504 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 PAGE5Q96GU1 130 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 SPATA17Q96L03 361 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CYP2S1Q96SQ9 504 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CGRRF1Q99675 332 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 SYT15Q9BQS2 421 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 MRPL45Q9BRJ2 306 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 SNX25Q9H3E2 840 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 EBF3Q9H4W6 596 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 TRPC7Q9HCX4 862 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CRTAC1Q9NQ79 661 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 HPS4Q9NQG7 708 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CGNQ9P2M7 1197 aaKnown RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 NCDNQ9UBB6 729 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 UXTQ9UBK9 157 aaPredicted RBP7.32□□□□□ -1.24
RFC1-215ENST00000512881 CITO14578 2027 aa7.32□□□□□ -1.24
RFC1-215ENST00000512881 CACNA1AO00555 2505 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 TRAV19A0A0A6YYK7 116 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 OTOL1A6NHN0 477 aaPredicted RBP7.31□□□□□ -1.24
RFC1-215ENST00000512881 TRDMT1O14717 391 aaKnown RBP7.31□□□□□ -1.24
RFC1-215ENST00000512881 KLRC4O43908 158 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 EXOC3O60645 756 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 TACC1O75410 805 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 TADA3O75528 432 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 UBOX5O94941 541 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 PAPSS2O95340 614 aaPredicted RBP7.31□□□□□ -1.24
RFC1-215ENST00000512881 ARSAP15289 507 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 PTPN1P18031 435 aaKnown RBP7.31□□□□□ -1.24
RFC1-215ENST00000512881 CMA1P23946 247 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 ATICP31939 592 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 FNTBP49356 437 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 MYL6P60660 151 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 AMPD2Q01433 879 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 DMWDQ09019 674 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 STK4Q13043 487 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 TRPC3Q13507 836 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 WDR72Q3MJ13 1102 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 MDH1BQ5I0G3 518 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 VSTM1Q6UX27 236 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 Q6ZS52 159 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 FSIP1Q8NA03 581 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 OR6B3Q8NGW1 331 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 GOLGA5Q8TBA6 731 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 SECISBP2LQ93073 1101 aaKnown RBP7.31□□□□□ -1.24
RFC1-215ENST00000512881 RMDN1Q96DB5 314 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 CEP295NLQ96MC4 621 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 SLC22A12Q96S37 553 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 KIF9Q9HAQ2 790 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 C2orf42Q9NWW7 574 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 ADAMTS1Q9UHI8 967 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 SMG5Q9UPR3 1016 aaKnown RBP7.31□□□□□ -1.24
RFC1-215ENST00000512881 NME7Q9Y5B8 376 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
RFC1-215ENST00000512881 CEP250Q9BV73 2442 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 A0A1B0GVL5 298 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 C2orf78A6NCI8 922 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 A8MXQ7 604 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 K7ESF4 209 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 RGS13O14921 159 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 ATE1O95260 518 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 KRT1P04264 644 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 CKMP06732 381 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 PFKFB1P16118 471 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 HDCP19113 662 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 ANXA13P27216 316 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 HOXA6P31267 233 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 HOXC13P31276 330 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 TRHRP34981 398 aaPredicted RBP7.3□□□□□ -1.24
RFC1-215ENST00000512881 CASP4P49662 377 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 GALK1P51570 392 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 AP3M2P53677 418 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 TNNC1P63316 161 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 GRSF1Q12849 480 aaKnown RBP eCLIP7.3□□□□□ -1.24
RFC1-215ENST00000512881 MTF1Q14872 753 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 LPAL2Q16609 132 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 TMEM196Q5HYL7 178 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 HEATR6Q6AI08 1181 aaKnown RBP7.3□□□□□ -1.24
RFC1-215ENST00000512881 FSTL4Q6MZW2 842 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 SPOCD1Q6ZMY3 1216 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 DENND5BQ6ZUT9 1274 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 LONP2Q86WA8 852 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 ARL14EPQ8N8R7 260 aaPredicted RBP7.3□□□□□ -1.24
RFC1-215ENST00000512881 PLEKHO2Q8TD55 490 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 SH3RF2Q8TEC5 729 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 PARD3BQ8TEW8 1205 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 OSCP1Q8WVF1 389 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 SYAP1Q96A49 352 aaPredicted RBP7.3□□□□□ -1.24
RFC1-215ENST00000512881 CHFRQ96EP1 664 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 PCED1BQ96HM7 432 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 C8orf48Q96LL4 319 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 DIRC2Q96SL1 478 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 XYLT2Q9H1B5 865 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 LINC00597Q9H2U6 94 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 DPEP3Q9H4B8 488 aa7.3□□□□□ -1.24
RFC1-215ENST00000512881 ECT2Q9H8V3 914 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms