RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PARP6Q2NL67 630 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 ERAP2Q6P179 960 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 OR56A4Q8NGH8 313 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 DLG3Q92796 817 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 NMD3Q96D46 503 aaKnown RBP12.75□□□□□ -0.37
COL11A1-210ENST00000512756 RGS18Q9NS28 235 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 CELF2O95319 508 aaKnown RBP12.75□□□□□ -0.37
COL11A1-210ENST00000512756 CPSF4O95639 269 aaKnown RBP12.75□□□□□ -0.37
COL11A1-210ENST00000512756 SLC2A4P14672 509 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 HALP42357 657 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 CAPZA2P47755 286 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 TBX4P57082 545 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 ARMCX4Q5H9R4 360 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 SLC30A10Q6XR72 485 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
COL11A1-210ENST00000512756 PHF21BQ96EK2 531 aa12.75□□□□□ -0.37
COL11A1-210ENST00000512756 CELF6Q96J87 481 aaKnown RBP12.75□□□□□ -0.37
COL11A1-210ENST00000512756 COPS7BQ9H9Q2 264 aaPredicted RBP12.75□□□□□ -0.37
COL11A1-210ENST00000512756 CBX4O00257 560 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 TCF3P15923 654 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 GRK3P35626 688 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 TTMPQ5BVD1 217 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CEP78Q5JTW2 689 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 DEFB106AQ8N104 65 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF398Q8TD17 642 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 MTERF3Q96E29 417 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ACOX2Q99424 681 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 GEMIN8Q9NWZ8 242 aaKnown RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ENOPH1Q9UHY7 261 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 AP3M1Q9Y2T2 418 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 PCDHB5Q9Y5E4 795 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CNTNAP2Q9UHC6 1331 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 SIGLEC16A6NMB1 481 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 LACTBL1A8MY62 500 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CXCL11O14625 94 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 KLRC4O43908 158 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 SNX3O60493 162 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF7P17097 686 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 C1DQ13901 141 aaKnown RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 FKBP1CQ5VVH2 108 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ZNF470Q6ECI4 717 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 SLC9A9Q8IVB4 645 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 SVOPQ8N4V2 548 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 MKL1Q969V6 931 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 FAM136AQ96C01 138 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 TMEM237Q96Q45 408 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CYP39A1Q9NYL5 469 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CYP3A7-CYP3A51PA0A087WV96 503 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 A0A087X1B8 175 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 VAPBO95292 243 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 RAG1P15918 1043 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 TPH1P17752 444 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CYP3A7P24462 503 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ALDH5A1P51649 535 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 SLC16A1P53985 500 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CXCL9Q07325 125 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 EID3Q8N140 333 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 MIER2Q8N344 545 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 BHMTQ93088 406 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ZBTB10Q96DT7 871 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 TBL1YQ9BQ87 522 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 UGT2B28Q9BY64 529 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ENTPD7Q9NQZ7 604 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 RHBDL2Q9NX52 303 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 CLOCKO15516 846 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 HNRNPH3P31942 346 aaKnown RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 ALDH6A1Q02252 535 aaKnown RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 LY6KQ17RY6 165 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 B3GALNT2Q8NCR0 500 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 MRPL48Q96GC5 212 aaKnown RBP12.74□□□□□ -0.37
COL11A1-210ENST00000512756 LRRC19Q9H756 370 aa12.74□□□□□ -0.37
COL11A1-210ENST00000512756 PDE2AO00408 941 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-210ENST00000512756 RBL1P28749 1068 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TUBP50607 506 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 EPHB3P54753 998 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 GTF2BQ00403 316 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 PPATQ06203 517 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 CNGA2Q16280 664 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 EDEM1Q92611 657 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 C9orf16Q9BUW7 83 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ELOVL4Q9GZR5 314 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 SETD4Q9NVD3 440 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
COL11A1-210ENST00000512756 ANKRD63C9JTQ0 380 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms