RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SLC8A1P32418 973 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 RFX5P48382 616 aaPredicted RBP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SLC37A1P57057 533 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SHC2P98077 582 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 GRM4Q14833 912 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 DLGAP5Q15398 846 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SLC5A9Q2M3M2 681 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 COBLL1Q53SF7 1204 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 FAM209BQ5JX69 171 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 KIAA1755Q5JYT7 1200 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 WASHC2DQ5SRD0 308 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 TRILQ7L0X0 811 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 BEND5Q7L4P6 421 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 CTU1Q7Z7A3 348 aaKnown RBP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 DCP1BQ8IZD4 617 aaKnown RBP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 TXLNBQ8N3L3 684 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SMRP1Q8NCR6 262 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 SLC22A17Q8WUG5 538 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 IP6K1Q92551 441 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 NEUROG1Q92886 237 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 WDR83Q9BRX9 315 aaKnown RBP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 FZD3Q9NPG1 666 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 KLHL42Q9P2K6 505 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 IPO11Q9UI26 975 aaKnown RBP2.62□□□□□ -1.99
PDGFC-208ENST00000512711 INSL5Q9Y5Q6 135 aa2.62□□□□□ -1.99
PDGFC-208ENST00000512711 IFITM10A6NMD0 228 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 BECN2A8MW95 431 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 PRSS44E7EML9 344 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 USP12O75317 370 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 CNTN5O94779 1100 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 VIPP01282 170 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 MYL3P08590 195 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 ITGA5P08648 1049 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 T-ENOLP0DO92 83 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 CIITAP33076 1130 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 ZXDBP98169 803 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 GAD2Q05329 585 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 TRAF1Q13077 416 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 MAPKAPK3Q16644 382 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 C6orf10Q5SRN2 563 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 DDIASQ8IXT1 998 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 NUDCD2Q8WVJ2 157 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 ZFPM2Q8WW38 1151 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 MIB2Q96AX9 1013 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 URB1-AS1Q96HZ7 61 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 EIF3CQ99613 913 aaKnown RBP2.61□□□□□ -1.99
PDGFC-208ENST00000512711 NUDT22Q9BRQ3 303 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 ABHD14AQ9BUJ0 271 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 TRIM2Q9C040 744 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 MAGEH1Q9H213 219 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 MAP6D1Q9H9H5 199 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 PRDM16Q9HAZ2 1276 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 SIRT3Q9NTG7 399 aaPredicted RBP2.61□□□□□ -1.99
PDGFC-208ENST00000512711 FNIP2Q9P278 1114 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 CKAP5Q14008 2032 aa2.61□□□□□ -1.99
PDGFC-208ENST00000512711 LMTK3Q96Q04 1460 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 LOC105369274A0A096LPK9 316 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 LOC102723532A0A0G2JNH3 316 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 PNMA6EA0A0J9YXQ4 647 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 CXorf65A6NEN9 183 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 CYSRT1A8MQ03 144 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 LACTBL1A8MY62 500 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 RHODO00212 210 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 FGF18O76093 207 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 SGPL1O95470 568 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 PGGT1BP53609 377 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 FOXL2P58012 376 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 PMS2P11Q13670 270 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 INO80DQ53TQ3 878 aaPredicted RBP2.6□□□□□ -1.99
PDGFC-208ENST00000512711 USP17L6PQ6QN14 398 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 KRT27Q7Z3Y8 459 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 RASGRP3Q8IV61 690 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 ADGRF3Q8IZF5 1079 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 OR4N4Q8N0Y3 316 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 OR52N4Q8NGI2 321 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 TTC17Q96AE7 1141 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 C18orf8Q96DM3 657 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 LMLNQ96KR4 655 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 NTPCRQ9BSD7 190 aaKnown RBP2.6□□□□□ -1.99
PDGFC-208ENST00000512711 TMEM204Q9BSN7 226 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 COLEC11Q9BWP8 271 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 ARHGAP39Q9C0H5 1083 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 ISCUQ9H1K1 167 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 FBXO28Q9NVF7 368 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 FBXO4Q9UKT5 387 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 PCDHA7Q9UN72 937 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 DTNAQ9Y4J8 743 aa2.6□□□□□ -1.99
PDGFC-208ENST00000512711 A0A1B0GVT2 93 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 RPS10-NUDT3A0A1W2PQS6 291 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 DPPA5A6NC42 116 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 PMM2O15305 246 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 NFATC1O95644 943 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 NTSR2O95665 410 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 IFNA2P01563 188 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 ACAA1P09110 424 aaPredicted RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 ALDOCP09972 364 aaKnown RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 TNFSF4P23510 183 aa2.59□□□□□ -1.99
PDGFC-208ENST00000512711 TBXAS1P24557 533 aaPredicted RBP2.59□□□□□ -1.99
PDGFC-208ENST00000512711 KLRK1P26718 216 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms