RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 MSLNLQ96KJ4 702 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 PPP1R13BQ96KQ4 1090 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 SLITRK1Q96PX8 696 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 CPXM1Q96SM3 734 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 SYT11Q9BT88 431 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 ADAM7Q9H2U9 754 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 HCFC1R1Q9NWW0 138 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 ARHGAP20Q9P2F6 1191 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 DNMT3BQ9UBC3 853 aaKnown RBP9.88□□□□□ -0.83
SNF8-211ENST00000512243 CYTH4Q9UIA0 394 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 COG5Q9UP83 839 aa9.88□□□□□ -0.83
SNF8-211ENST00000512243 COL6A3P12111 3177 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 FAM170AA1A519 330 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 E5RJQ4 531 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 DDX3XO00571 662 aaKnown RBP eCLIP9.87□□□□□ -0.839e-16■■■□□ 17.8
SNF8-211ENST00000512243 ZNF197O14709 1029 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 NRDCO43847 1150 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 AKR1B10O60218 316 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 CALB1P05937 261 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 PTMAP06454 111 aaKnown RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 MYL4P12829 197 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 UNGP13051 313 aaPredicted RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 HMGA1P17096 107 aaKnown RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 GABRR2P28476 465 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 CYLC1P35663 651 aaPredicted RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 TKTL1P51854 596 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 EPHA5P54756 1037 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 TAF10Q12962 218 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 RAB41Q5JT25 222 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 ATAT1Q5SQI0 421 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 NXPE4Q6UWF7 544 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 CCDC186Q7Z3E2 898 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 PDZD8Q8NEN9 1154 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 OLIG1Q8TAK6 271 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 OVCA2Q8WZ82 227 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 WDR89Q96FK6 387 aaPredicted RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 CCDC42Q96M95 316 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 NECTIN4Q96NY8 510 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 PCDHB18PQ96TA0 734 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 C11orf70Q9BRQ4 267 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 ULBP1Q9BZM6 244 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 S1PR5Q9H228 398 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 SEMA6CQ9H3T2 930 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 CCDC86Q9H6F5 360 aaKnown RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 NHEJ1Q9H9Q4 299 aaPredicted RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 ZNF334Q9HCZ1 680 aaPredicted RBP9.87□□□□□ -0.83
SNF8-211ENST00000512243 CNGB3Q9NQW8 809 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 IL37Q9NZH6 218 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 TRPM5Q9NZQ8 1165 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 GMIPQ9P107 970 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 SCML2Q9UQR0 700 aa9.87□□□□□ -0.83
SNF8-211ENST00000512243 NCANO14594 1321 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 TMCO5BA8MYB1 307 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 TADA3O75528 432 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ZBED1O96006 694 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ERBB2P04626 1255 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 USP17L7P0C7H9 530 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 GZMAP12544 262 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 MAPK8P45983 427 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 PPP3CCP48454 512 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 RPL34P49207 117 aaKnown RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 DAOAP59103 153 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 NTHL1P78549 312 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 SLC18A3Q16572 532 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ARHGAP15Q53QZ3 475 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 OR6B2Q6IFH4 312 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ACAD10Q6JQN1 1059 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 MMS22LQ6ZRQ5 1243 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 TOGARAM2Q6ZUX3 1019 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 GET4Q7L5D6 327 aaPredicted RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 TMEM110Q86TL2 294 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 DTX1Q86Y01 620 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 TMTC1Q8IUR5 882 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 SCML4Q8N228 414 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ARHGAP18Q8N392 663 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 WDTC1Q8N5D0 677 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 CCDC112Q8NEF3 446 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 SLC30A5Q8TAD4 765 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 IRGQQ8WZA9 623 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 MRPS31Q92665 395 aaKnown RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 GOLGA1Q92805 767 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 C18orf8Q96DM3 657 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 CHP1Q99653 195 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 BAG1Q99933 345 aaPredicted RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 ATXN3LQ9H3M9 355 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 WDR6Q9NNW5 1121 aaKnown RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 TLR8Q9NR97 1041 aaKnown RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 TAS2R14Q9NYV8 317 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ADAM22Q9P0K1 906 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 THEGQ9P2T0 379 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 TJP2Q9UDY2 1190 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 ADAMTS1Q9UHI8 967 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 STRIP2Q9ULQ0 834 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 FAM50BQ9Y247 325 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 MRPS23Q9Y3D9 190 aaKnown RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 USP15Q9Y4E8 981 aaPredicted RBP9.86□□□□□ -0.83
SNF8-211ENST00000512243 XIRP2A4UGR9 3374 aa9.86□□□□□ -0.83
SNF8-211ENST00000512243 A0A087X0T9 212 aa9.85□□□□□ -0.83
SNF8-211ENST00000512243 A0A1W2PQH9 124 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms