RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 A0A1W2PP55 124 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 ERVH48-1M5A8F1 160 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 TULP2O00295 520 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 SIN3BO75182 1162 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 KRT10P13645 584 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 GLDCP23378 1020 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 PIK3CAP42336 1068 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 LY6DQ14210 128 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 ZNF394Q53GI3 561 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 RSRC2Q7L4I2 434 aaKnown RBP19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 PIGZQ86VD9 579 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 GANCQ8TET4 914 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 BACH2Q9BYV9 841 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 CAAP1Q9H8G2 361 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 SFMBT1Q9UHJ3 866 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 STOML2Q9UJZ1 356 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 STRIP2Q9ULQ0 834 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 BOD1L1Q8NFC6 3051 aa19.82■□□□□ 0.76
HMGCS1-206ENST00000511774 TDRD6O60522 2096 aaKnown RBP19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 SYT1P21579 422 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 NASPP49321 788 aaPredicted RBP19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 NXPH1P58417 271 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 CUL4BQ13620 913 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 TAF1BQ53T94 588 aaPredicted RBP19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 RFWD3Q6PCD5 774 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 SHC4Q6S5L8 630 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 AHI1Q8N157 1196 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 LINC00301Q8NCQ3 95 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 GOLGA1Q92805 767 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 TMA16Q96EY4 203 aaKnown RBP19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 MYEOVQ96EZ4 313 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 MRGPRX3Q96LB0 322 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 CUEDC2Q9H467 287 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 GDF3Q9NR23 364 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 INTS6Q9UL03 887 aaKnown RBP19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 CLCA2Q9UQC9 943 aa19.81■□□□□ 0.76
HMGCS1-206ENST00000511774 GOLGA6L7A0A1B0GV03 622 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 MSI1O43347 362 aaKnown RBP19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 CKMT2P17540 419 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 ACTN2P35609 894 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 PPP2CBP62714 309 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 PPP2CAP67775 309 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 AMPD3Q01432 767 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 CUL4AQ13619 759 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 CST6Q15828 149 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 PROX2Q3B8N5 592 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 ARHGAP40Q5TG30 622 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 KDM7AQ6ZMT4 941 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 SLC9A9Q8IVB4 645 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 DHX40Q8IX18 779 aaKnown RBP19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 GRAMD1CQ8IYS0 662 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 CACTIN-AS1Q8N1I8 211 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 AADATQ8N5Z0 425 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 KIAA0895Q8NCT3 520 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 OR2T34Q8NGX1 318 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 TMC2Q8TDI7 906 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 TAS1R2Q8TE23 839 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 HIC2Q96JB3 615 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 LGMNQ99538 433 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 ULBP1Q9BZM6 244 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 KCTD10Q9H3F6 313 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 CYP3A43Q9HB55 503 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 SUN2Q9UH99 717 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 ADAMTS1Q9UHI8 967 aa19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 UBR5O95071 2799 aaPredicted RBP19.8■□□□□ 0.76
HMGCS1-206ENST00000511774 TLR4O00206 839 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 TRIM38O00635 465 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 SLC6A4P31645 630 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 RXRGP48443 463 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 TKTL1P51854 596 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 STK4Q13043 487 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 ADGRF1Q5T601 910 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 C9orf64Q5T6V5 341 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 PM20D1Q6GTS8 502 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 MMAAQ8IVH4 418 aaKnown RBP19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 FAM181AQ8N9Y4 354 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 EDEM1Q92611 657 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 TTC9Q92623 222 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 NIF3L1Q9GZT8 377 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 MTMR6Q9Y217 621 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 NCKAP1Q9Y2A7 1128 aa19.79■□□□□ 0.76
HMGCS1-206ENST00000511774 YKT6O15498 198 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 KLRC4O43908 158 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 RNASEH2AO75792 299 aaKnown RBP19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 ATP5BP06576 529 aaKnown RBP19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 TRIM49P0CI25 452 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 TRIM49CP0CI26 452 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 POLR2EP19388 210 aaKnown RBP19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 HARS2P49590 506 aaKnown RBP19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 CCR5P51681 352 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 PPP3CAQ08209 521 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 ILKQ13418 452 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 HNRNPA1L2Q32P51 320 aaKnown RBP19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 ARHGAP18Q8N392 663 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 IQUBQ8NA54 791 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 SLC4A11Q8NBS3 891 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 TMEM174Q8WUU8 243 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 TTC17Q96AE7 1141 aa19.78■□□□□ 0.76
HMGCS1-206ENST00000511774 SERAC1Q96JX3 654 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms