RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 C22orf23Q9BZE7 217 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 FTOQ9C0B1 505 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01088-207ENST00000511241 LSG1Q9H089 658 aaKnown RBP8.37□□□□□ -1.07
LINC01088-207ENST00000511241 RIOX1Q9H6W3 641 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 ATP6V0A4Q9HBG4 840 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 LY9Q9HBG7 655 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 TPCN1Q9ULQ1 816 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 BAZ2BQ9UIF8 2168 aaKnown RBP8.37□□□□□ -1.07
LINC01088-207ENST00000511241 CDHR4A6H8M9 788 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 GCOM1H8Y6P7 765 aaPredicted RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 NBNO60934 754 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 AGFG2O95081 481 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 GGPS1O95749 300 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 AHSGP02765 367 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 CA3P07451 260 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 POLR2MP0CAP2 368 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 UBA1P22314 1058 aaKnown RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 SLC6A2P23975 617 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 SOX8P57073 446 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 DEFB103AP81534 67 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 GHRHRQ02643 423 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 TRDNQ13061 729 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 PGM5Q15124 567 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 RAB30Q15771 203 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 TRIM71Q2Q1W2 868 aaKnown RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 BMP2KLQ5H9B9 411 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 CELF3Q5SZQ8 465 aaKnown RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 FAM102AQ5T9C2 384 aaPredicted RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 AGAP9Q5VTM2 703 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 METRNLQ641Q3 311 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 APOA5Q6Q788 366 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 USP17L6PQ6QN14 398 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 CASC1Q6TDU7 716 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 TMPRSS6Q8IU80 811 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 RHOT2Q8IXI1 618 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 MAP4K1Q92918 833 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 MRGPRX1Q96LB2 322 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 SPATA33Q96N06 139 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 MPHOSPH6Q99547 160 aaKnown RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 C1QTNF3Q9BXJ4 246 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 LRRC27Q9C0I9 530 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 SIK2Q9H0K1 926 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 SLC28A3Q9HAS3 691 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 GPR35Q9HC97 309 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 SLAMF7Q9NQ25 335 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 EIF2B4Q9UI10 523 aaKnown RBP8.36□□□□□ -1.07
LINC01088-207ENST00000511241 MYO9BQ13459 2157 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 TET1Q8NFU7 2136 aa8.36□□□□□ -1.07
LINC01088-207ENST00000511241 B4DLN1 442 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 HAS3O00219 553 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 LEFTY2O00292 366 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 CHEK2O96017 543 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 RPL17P18621 184 aaKnown RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 CASTP20810 708 aaKnown RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 PEX2P28328 305 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 APOBEC3AP31941 199 aaPredicted RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 NT5C2P49902 561 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 MRPL12P52815 198 aaKnown RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 NOMO3P69849 1222 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 TAP1Q03518 808 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 EFEMP1Q12805 493 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 LRRC8DQ7L1W4 858 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 HERC6Q8IVU3 1022 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 SRBD1Q8N5C6 995 aaKnown RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 NCOA7Q8NI08 942 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 PPTC7Q8NI37 304 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 KBTBD7Q8WVZ9 684 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 RUFY2Q8WXA3 655 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 APIPQ96GX9 242 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 SEZ6LQ9BYH1 1024 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 NUP62CLQ9H1M0 184 aa8.35□□□□□ -1.07
LINC01088-207ENST00000511241 MTIF3Q9H2K0 278 aaKnown RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.35□□□□□ -1.07
LINC01088-207ENST00000511241 GBF1Q92538 1859 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 ISM1B1AKI9 464 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SPATA31D3P0C874 917 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 MYF5P13349 255 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 HDCP19113 662 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 CCND2P30279 289 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 WDR5P61964 334 aaKnown RBP8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SP4Q02446 784 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 TFF2Q03403 129 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 BFSP2Q13515 415 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 HABP2Q14520 560 aaPredicted RBP8.34□□□□□ -1.07
LINC01088-207ENST00000511241 UBE2SQ16763 222 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SPATS1Q496A3 300 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SPATA31D4Q6ZUB0 917 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SESTD1Q86VW0 696 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 KRT78Q8N1N4 520 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 ARNTL2Q8WYA1 636 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 TCEANC2Q96MN5 208 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 C16orf70Q9BSU1 422 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 SLC45A2Q9UMX9 530 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 FAM50BQ9Y247 325 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
LINC01088-207ENST00000511241 FRMPD4Q14CM0 1322 aa8.33□□□□□ -1.08
LINC01088-207ENST00000511241 ERICH2A1L162 156 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms