RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 NEK2P51955 445 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
USP53-206ENST00000510737 HTRA4P83105 476 aaPredicted RBP7.74□□□□□ -1.17
USP53-206ENST00000510737 LMAN2Q12907 356 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 MLC1Q15049 377 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 PARP10Q53GL7 1025 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 KIF6Q6ZMV9 814 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 MRPL10Q7Z7H8 261 aaKnown RBP7.74□□□□□ -1.17
USP53-206ENST00000510737 SFTPA1Q8IWL2 248 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 SIRT6Q8N6T7 355 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 CTHRC1Q96CG8 243 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 EYA3Q99504 573 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 DPH1Q9BZG8 443 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 MS4A7Q9GZW8 240 aaPredicted RBP7.74□□□□□ -1.17
USP53-206ENST00000510737 SMURF2Q9HAU4 748 aa7.74□□□□□ -1.17
USP53-206ENST00000510737 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.74□□□□□ -1.17
USP53-206ENST00000510737 SSC5DA1L4H1 1573 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 TMEM232C9JQI7 657 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 BTN3A1O00481 513 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 CCL5P13501 91 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 APEHP13798 732 aaKnown RBP7.73□□□□□ -1.17
USP53-206ENST00000510737 NCLP19338 710 aaKnown RBP7.73□□□□□ -1.17
USP53-206ENST00000510737 PRKAG1P54619 331 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 PPP1R35Q8TAP8 253 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 KBTBD7Q8WVZ9 684 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 SNX27Q96L92 541 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 FYTTD1Q96QD9 318 aaKnown RBP7.73□□□□□ -1.17
USP53-206ENST00000510737 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 MXD3Q9BW11 206 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 ANKRD6Q9Y2G4 727 aa7.73□□□□□ -1.17
USP53-206ENST00000510737 SIPA1L3O60292 1781 aaPredicted RBP7.73□□□□□ -1.17
USP53-206ENST00000510737 H3BNC9 293 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 CES2O00748 559 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 ABLIM3O94929 683 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 SGPL1O95470 568 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 XRCC6P12956 609 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP53-206ENST00000510737 HTR1BP28222 390 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 SATB1Q01826 763 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 IFIT1BQ5T764 474 aaKnown RBP7.72□□□□□ -1.17
USP53-206ENST00000510737 LMBRD2Q68DH5 695 aaPredicted RBP7.72□□□□□ -1.17
USP53-206ENST00000510737 MCM10Q7L590 875 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 TDHQ8IZJ6 230 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 U2AF1L4Q8WU68 220 aaKnown RBP7.72□□□□□ -1.17
USP53-206ENST00000510737 BRI3BPQ8WY22 251 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 MAP4K1Q92918 833 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 ZMAT3Q9HA38 289 aaKnown RBP7.72□□□□□ -1.17
USP53-206ENST00000510737 CNNM1Q9NRU3 951 aa7.72□□□□□ -1.17
USP53-206ENST00000510737 ZNF646O15015 1829 aaPredicted RBP7.71□□□□□ -1.17
USP53-206ENST00000510737 BTBD19C9JJ37 291 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 AP1G1O43747 822 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 GCATO75600 419 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 OFD1O75665 1012 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 MT-CO3P00414 261 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 KITP10721 976 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 THBS4P35443 961 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 DCTN1Q14203 1278 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 FAM109BQ6ICB4 259 aaPredicted RBP7.71□□□□□ -1.18
USP53-206ENST00000510737 ZDHHC24Q6UX98 284 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 LINC01465Q8N7H1 131 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 MAML1Q92585 1016 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 CCDC17Q96LX7 622 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 SIGLEC11Q96RL6 698 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 ADGRE3Q9BY15 652 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 DEFB129Q9H1M3 183 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 ZMYND8Q9ULU4 1186 aaPredicted RBP7.71□□□□□ -1.18
USP53-206ENST00000510737 DRG1Q9Y295 367 aaKnown RBP7.71□□□□□ -1.18
USP53-206ENST00000510737 SCN9AQ15858 1988 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 NUP98P52948 1817 aa7.71□□□□□ -1.18
USP53-206ENST00000510737 LRRC37AA6NMS7 1700 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 CCDC187A0A096LP49 1063 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 UBXN7O94888 489 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 ATF7P17544 494 aaPredicted RBP7.7□□□□□ -1.18
USP53-206ENST00000510737 VCAM1P19320 739 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 CCKARP32238 428 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 DIO1P49895 249 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 COPB1P53618 953 aaKnown RBP7.7□□□□□ -1.18
USP53-206ENST00000510737 PRMT2P55345 433 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 GHRHRQ02643 423 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 LEXMQ3ZCV2 418 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 ZNF783Q6ZMS7 281 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 OSR1Q8TAX0 266 aaPredicted RBP7.7□□□□□ -1.18
USP53-206ENST00000510737 DNAJB14Q8TBM8 379 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 ZBED3Q96IU2 234 aaPredicted RBP7.7□□□□□ -1.18
USP53-206ENST00000510737 THUMPD2Q9BTF0 503 aaKnown RBP7.7□□□□□ -1.18
USP53-206ENST00000510737 RHOBTB2Q9BYZ6 727 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 AASDHPPTQ9NRN7 309 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 TMEM184CQ9NVA4 438 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 TRMT112Q9UI30 125 aaKnown RBP7.7□□□□□ -1.18
USP53-206ENST00000510737 RIPOR2Q9Y4F9 1068 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 TAF1P21675 1872 aa7.7□□□□□ -1.18
USP53-206ENST00000510737 DDX60Q8IY21 1712 aaKnown RBP7.69□□□□□ -1.18
USP53-206ENST00000510737 CACNA1AO00555 2505 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 MYMKA6NI61 221 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 SPRY2O43597 315 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 TLR2O60603 784 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 UFL1O94874 794 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 BCAT1P54687 386 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 RPS8P62241 208 aaKnown RBP7.69□□□□□ -1.18
USP53-206ENST00000510737 TAF7Q15545 349 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms