RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 STARD13Q9Y3M8 1113 aa14.06□□□□□ -0.16
SNF8-206ENST00000509989 DAAM1Q9Y4D1 1078 aa14.06□□□□□ -0.16
SNF8-206ENST00000509989 PCDHGA2Q9Y5H1 932 aa14.06□□□□□ -0.16
SNF8-206ENST00000509989 HS3ST4Q9Y661 456 aa14.06□□□□□ -0.16
SNF8-206ENST00000509989 NUMA1Q14980 2115 aa14.06□□□□□ -0.16
SNF8-206ENST00000509989 PTPRZ1P23471 2315 aaPredicted RBP14.06□□□□□ -0.16
SNF8-206ENST00000509989 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 GOLGA6L19H0YKK7 550 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 DDX3XO00571 662 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNF8-206ENST00000509989 PAGE1O75459 146 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 CYBBP04839 570 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 HLA-EP13747 358 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 BCKDHBP21953 392 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 PRKCHP24723 683 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 RFC1P35251 1148 aaPredicted RBP14.05□□□□□ -0.16
SNF8-206ENST00000509989 IL12RB1P42701 662 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 CTSOP43234 321 aaPredicted RBP14.05□□□□□ -0.16
SNF8-206ENST00000509989 CXCR3P49682 368 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 ATP11AP98196 1134 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 OGDHQ02218 1023 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 LMAN2Q12907 356 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 FUT11Q495W5 492 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 CCDC14Q49A88 953 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 HGSNATQ68CP4 663 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 FBXL22Q6P050 247 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 CHST9Q7L1S5 443 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 KIAA0907Q7Z7F0 614 aaPredicted RBP14.05□□□□□ -0.16
SNF8-206ENST00000509989 PHF13Q86YI8 300 aaPredicted RBP14.05□□□□□ -0.16
SNF8-206ENST00000509989 ZDHHC17Q8IUH5 632 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 CARNMT1Q8N4J0 409 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 FAM160A2Q8N612 972 aaPredicted RBP14.05□□□□□ -0.16
SNF8-206ENST00000509989 RXFP2Q8WXD0 754 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNF8-206ENST00000509989 ADAM22Q9P0K1 906 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 GON4LQ3T8J9 2241 aa14.05□□□□□ -0.16
SNF8-206ENST00000509989 TCRBV21S2A2A0A5A6 115 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 C2CD4BA6NLJ0 364 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 AXIN1O15169 862 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 CNTN5O94779 1100 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 APOEP02649 317 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 GYPCP04921 128 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 HOXB2P14652 356 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 GABRG2P18507 467 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 TNFAIP3P21580 790 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 RRM1P23921 792 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 HOXA6P31267 233 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 DGKEP52429 567 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 RPL7AP62424 266 aaKnown RBP14.04□□□□□ -0.16
SNF8-206ENST00000509989 DEUP1Q05D60 604 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 AUHQ13825 339 aaKnown RBP14.04□□□□□ -0.16
SNF8-206ENST00000509989 ZNF234Q14588 700 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 PTPRNQ16849 979 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 CDO1Q16878 200 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 SFMBT2Q5VUG0 894 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 ACAD10Q6JQN1 1059 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 TRIM72Q6ZMU5 477 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 PRR23BQ6ZRT6 265 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 ANKS1BQ7Z6G8 1248 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 KBTBD6Q86V97 674 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 RASSF3Q86WH2 238 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 FAM131BQ86XD5 332 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 ZNF683Q8IZ20 524 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 CHPFQ8IZ52 775 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 APCDD1Q8J025 514 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 TSTD1Q8NFU3 115 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 RNF34Q969K3 372 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 EXOC4Q96A65 974 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 ACDQ96AP0 544 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 BTN2A3PQ96KV6 586 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 CIPCQ9C0C6 399 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 TKTL2Q9H0I9 626 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 SIK2Q9H0K1 926 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 EPC1Q9H2F5 836 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 ARHGEF38Q9NXL2 777 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 AIPL1Q9NZN9 384 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 THAP10Q9P2Z0 257 aaPredicted RBP14.04□□□□□ -0.16
SNF8-206ENST00000509989 GGA2Q9UJY4 613 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 SMG5Q9UPR3 1016 aaKnown RBP14.04□□□□□ -0.16
SNF8-206ENST00000509989 STON1Q9Y6Q2 735 aa14.04□□□□□ -0.16
SNF8-206ENST00000509989 CHD5Q8TDI0 1954 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 CFAP54Q96N23 3096 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 APBB3O95704 486 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 LMNAP02545 664 aaKnown RBP14.03□□□□□ -0.16
SNF8-206ENST00000509989 PABPC1P11940 636 aaKnown RBP14.03□□□□□ -0.16
SNF8-206ENST00000509989 MZF1P28698 734 aaPredicted RBP14.03□□□□□ -0.16
SNF8-206ENST00000509989 NTSR1P30989 418 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 CCR1P32246 355 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 SCNN1AP37088 669 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 PRKCIP41743 596 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 NSFP46459 744 aaKnown RBP14.03□□□□□ -0.16
SNF8-206ENST00000509989 PPP2R5DQ14738 602 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 SLC25A52Q3SY17 297 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 ALFQ53S48 1182 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 WDR59Q6PJI9 974 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 GAS2L3Q86XJ1 694 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 MFN1Q8IWA4 741 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 MCOLN2Q8IZK6 566 aa14.03□□□□□ -0.16
SNF8-206ENST00000509989 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms