RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 RNF225M0QZC1 329 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 TRIM38O00635 465 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 FOXD2O60548 495 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 LRIG2O94898 1065 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 HARSP12081 509 aaKnown RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 GZMAP12544 262 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 KRT13P13646 458 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 KRT9P35527 623 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 AP3M2P53677 418 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 PTENP60484 403 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 POU4F1Q01851 419 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 CACNB2Q08289 660 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 LAMTOR4Q0VGL1 99 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 TRIM25Q14258 630 aaKnown RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 CRY1Q16526 586 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 ZSCAN26Q16670 478 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF527Q8NB42 609 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 MNS1Q8NEH6 495 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 TRPV1Q8NER1 839 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 ELOA3Q8NG57 546 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 PRPF31Q8WWY3 499 aaKnown RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 TTC9Q92623 222 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 FGFBP2Q9BYJ0 223 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 MAGEH1Q9H213 219 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 RNPEPQ9H4A4 650 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 MYO6Q9UM54 1294 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 SF3B6Q9Y3B4 125 aaKnown RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 TELO2Q9Y4R8 837 aa7.46□□□□□ -1.22
CLCN3-206ENST00000507875 PDCD11Q14690 1871 aaKnown RBP7.46□□□□□ -1.22
CLCN3-206ENST00000507875 M0R082 166 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 HTRA2O43464 458 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 URI1O94763 535 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 AFPP02771 609 aaKnown RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 DHRS4L1P0CG22 281 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 KLRC1P26715 233 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 AXLP30530 894 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ASPAP45381 313 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ADAM17P78536 824 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 CAPSQ13938 189 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 GAS6Q14393 721 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MAPK6Q16659 721 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TIGD6Q17RP2 521 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ZC2HC1CQ53FD0 456 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MIIPQ5JXC2 388 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 PRAMEF19Q5SWL8 479 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MZT2BQ6NZ67 158 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TAF2Q6P1X5 1199 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 NFRKBQ6P4R8 1299 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MAEAQ7L5Y9 396 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TMEM110Q86TL2 294 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 CXorf67Q86X51 503 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF417Q8TAU3 575 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 RABGGTAQ92696 567 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 WDR24Q96S15 920 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF587Q96SQ5 575 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 SLC12A9Q9BXP2 914 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 IQCGQ9H095 443 aaKnown RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 FZD8Q9H461 694 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF304Q9HCX3 659 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MED4Q9NPJ6 270 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 GPATCH2Q9NW75 528 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TTC26A0AVF1 554 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 C17orf102A2RUQ5 167 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TMEM150BA6NC51 233 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 C2orf81A6NN90 581 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 PRR33A8MZF0 331 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ACKR2O00590 384 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MAN2B1O00754 1011 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 EXTL3O43909 919 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 KLHL41O60662 606 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ADAMTS4O75173 837 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 SMIM10L2AP0DMW4 78 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 SMIM10L2BP0DMW5 78 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 LIG4P49917 911 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ITGA8P53708 1063 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 RNF4P78317 190 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 PFKPQ01813 784 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 CETN1Q12798 172 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 DGKKQ5KSL6 1271 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 INTS11Q5TA45 600 aaKnown RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 LIN54Q6MZP7 749 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 WFDC8Q8IUA0 241 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 GPD1LQ8N335 351 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 OXR1Q8N573 874 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 DRAXINQ8NBI3 349 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-206ENST00000507875 ARRDC4Q8NCT1 418 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 OR8K1Q8NGG5 319 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 KAT2BQ92831 832 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TMEM143Q96AN5 459 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 TMEM165Q9HC07 324 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 LZTFL1Q9NQ48 299 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms