RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ERBB2P04626 1255 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 UCHL3P15374 230 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ITPKAP23677 461 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 CD70P32970 193 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 CDH5P33151 784 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 DPP6P42658 865 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 RPS24P62847 133 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 IRX4P78413 519 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 RPL6Q02878 288 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 CAMK2GQ13555 558 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 DRAP1Q14919 205 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 PTPRNQ16849 979 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ZC3H12AQ5D1E8 599 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 EFHC1Q5JVL4 640 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 LYSMD4Q5XG99 296 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 MBLAC2Q68D91 279 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC26A9Q7LBE3 791 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 PASD1Q8IV76 773 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC41A1Q8IVJ1 513 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 AHI1Q8N157 1196 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF557Q8N988 423 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 HJURPQ8NCD3 748 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF397Q8NF99 534 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 DDX1Q92499 740 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 PIGKQ92643 395 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 TTC17Q96AE7 1141 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ERLEC1Q96DZ1 483 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 MYO19Q96H55 970 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF419Q96HQ0 510 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 BTN2A3PQ96KV6 586 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 GBP4Q96PP9 640 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 DDX50Q9BQ39 737 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 EDEM2Q9BV94 578 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 PLCB1Q9NQ66 1216 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ITM2CQ9NQX7 267 aa9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 INTS6Q9UL03 887 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-209ENST00000506632 ATXN2Q99700 1313 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 KCNU1A8MYU2 1149 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 SYNCRIPO60506 623 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 HSF2BPO75031 334 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 DAB1O75553 588 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 MOCS2O96007 188 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 APOEP02649 317 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 EPHX1P07099 455 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 DLDP09622 509 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 HLA-EP13747 358 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 TACR2P21452 398 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 KRT9P35527 623 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 BPIFB4P59827 614 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 ZNF33AQ06730 810 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 LMAN2Q12907 356 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 KRT31Q15323 416 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 DCAF6Q58WW2 860 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 TRIM61Q5EBN2 209 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 PPM1JQ5JR12 505 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 OTUD1Q5VV17 481 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 IL31Q6EBC2 164 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 SLC23A3Q6PIS1 610 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 KIAA1324Q6UXG2 1013 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 SERPINA13PQ6UXR4 307 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 C11orf57Q6ZUT1 292 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 TMPRSS6Q8IU80 811 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 MFN1Q8IWA4 741 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 DEFB106AQ8N104 65 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 OR2T3Q8NH03 318 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 CYB5D2Q8WUJ1 264 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 SIPA1Q96FS4 1042 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 NOX5Q96PH1 765 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 PRMT1Q99873 361 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 LSM14BQ9BX40 385 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 STK33Q9BYT3 514 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 GANQ9H2C0 597 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 PRDM16Q9HAZ2 1276 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 CAPN10Q9HC96 672 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 TAB2Q9NYJ8 693 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 WSB2Q9NYS7 404 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 PCDH15Q96QU1 1955 aa9.4□□□□□ -0.9
PDLIM5-209ENST00000506632 ACACBO00763 2458 aa9.4□□□□□ -0.91
PDLIM5-209ENST00000506632 ASCC3Q8N3C0 2202 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 TYW5A2RUC4 315 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 C4orf47A7E2U8 309 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 F8VZ95 297 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 GPR37O15354 613 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 LUC7L3O95232 432 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ATP5BP06576 529 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ADRB1P08588 477 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC2A3P11169 496 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 CYP11B1P15538 503 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 CD6P30203 668 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 SCNN1AP37088 669 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 GABRB2P47870 512 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 TPMTP51580 245 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 SNX16P57768 344 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 CDK17Q00537 523 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC6A3Q01959 620 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 ARID5AQ03989 594 aa9.39□□□□□ -0.91
PDLIM5-209ENST00000506632 RAPGEF1Q13905 1077 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms