RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ARHGAP6O43182 974 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HNRNPCL1O60812 293 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GUCY1B2O75343 617 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GPC4O75487 556 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 UPP2O95045 317 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SLC4A1P02730 911 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 THBDP07204 575 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LYNP07948 512 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PLS3P13797 630 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CASP14P31944 242 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HSPA9P38646 679 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CASP2P42575 452 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ASMTP46597 345 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RGS7P49802 495 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ALDH5A1P51649 535 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PPARDQ03181 441 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DNAJC3Q13217 504 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RIN1Q13671 783 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ACVR2BQ13705 512 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FAM122CQ6P4D5 195 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LINC00299Q6ZSB3 139 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ASPGQ86U10 573 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ITPRIPQ8IWB1 547 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CRIPAKQ8N1N5 446 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ALLCQ8N6M5 410 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DNAJC5GQ8N7S2 189 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 IFI44Q8TCB0 444 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 USP6NLQ92738 828 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GFM2Q969S9 779 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CLMNQ96JQ2 1002 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TEKT5Q96M29 485 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 C9orf16Q9BUW7 83 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HOXD1Q9GZZ0 328 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MIS12Q9H081 205 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EPB41L4BQ9H329 900 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SEMA6CQ9H3T2 930 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GDF3Q9NR23 364 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 IL17RBQ9NRM6 502 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HIF3AQ9Y2N7 669 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PPP2R2CQ9Y2T4 447 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGB5Q9Y5G0 923 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 WDR33Q9C0J8 1336 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 STK36Q9NRP7 1315 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 KIAA1549LQ6ZVL6 1849 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 REV3LO60673 3130 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ASTN1O14525 1302 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CCT8L1PA6NM43 557 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RAB27BO00194 218 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GPR39O43194 453 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HRO43593 1189 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SULT1B1O43704 296 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RBBP9O75884 186 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 KRT14P02533 472 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SNRPAP09012 282 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MYL4P12829 197 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ANPEPP15144 967 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 C5AR1P21730 350 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 NOS3P29474 1203 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MMP16P51512 607 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LGALS4P56470 323 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CAMK2DQ13557 499 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PRKG1Q13976 671 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SQLEQ14534 574 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 POU6F1Q14863 301 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FAM133BQ5BKY9 247 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 UBAP2Q5T6F2 1119 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SPECC1LQ69YQ0 1117 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LDHAL6AQ6ZMR3 332 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 UTS2BQ765I0 119 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF295-AS1Q8N0V1 137 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 METTL25Q8N6Q8 603 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC63Q8NA47 563 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 KCT2Q8NC54 265 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RAB3IL1Q8TBN0 382 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RHBDD1Q8TEB9 315 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PYROXD1Q8WU10 500 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GAL3ST3Q96A11 431 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 VWCEQ96DN2 955 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EPSTI1Q96J88 318 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PGBD1Q96JS3 809 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZSCAN31Q96LW9 406 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CASD1Q96PB1 797 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TTYH3Q9C0H2 523 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PITHD1Q9GZP4 211 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM59LQ9UK28 342 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CNOT6Q9ULM6 557 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MUC22E2RYF6 1773 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FRMD3A2A2Y4 597 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PMS2P1A4D2B8 440 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 STBD1O95210 358 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EYA4O95677 639 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 T-ENOLP0DO92 83 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CKMT1AP12532 417 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PEX2P28328 305 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HOXC12P31275 282 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ACSL1P33121 698 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CA8P35219 290 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PIK3CBP42338 1070 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SOX9P48436 509 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms