RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 CD70P32970 193 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 HNF1BP35680 557 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 GRIA4P48058 902 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 RAD23BP54727 409 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 NUCB2P80303 420 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 PDE4CQ08493 712 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
SNF8-204ENST00000506104 CAMK2GQ13555 558 aaPredicted RBP8.59□□□□□ -1.03
SNF8-204ENST00000506104 SGO2Q562F6 1265 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 C6orf118Q5T5N4 469 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 RNF219Q5W0B1 726 aaPredicted RBP8.59□□□□□ -1.03
SNF8-204ENST00000506104 BSPRYQ5W0U4 402 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 KRT39Q6A163 491 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 NCEH1Q6PIU2 408 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 MMAAQ8IVH4 418 aaKnown RBP8.59□□□□□ -1.03
SNF8-204ENST00000506104 MFN1Q8IWA4 741 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 NXPE2Q96DL1 559 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 MIS12Q9H081 205 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 SGK2Q9HBY8 427 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 TMEM8AQ9HCN3 771 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 TOR4AQ9NXH8 423 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 TSPAN16Q9UKR8 245 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 NFE2L3Q9Y4A8 694 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 PCDHGB2Q9Y5G2 931 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 USP3Q9Y6I4 520 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 ANKRD11Q6UB99 2663 aaPredicted RBP8.59□□□□□ -1.03
SNF8-204ENST00000506104 APC2O95996 2303 aa8.59□□□□□ -1.03
SNF8-204ENST00000506104 ASXL3Q9C0F0 2248 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3DA0A087WVF3 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3IA0A087WXS9 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3EA0A087X179 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3KA0A087X1G2 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3FA6NER0 549 aaPredicted RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 LRRC72A6NJI9 287 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3LB9A6J9 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 MID1O15344 667 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 RRP8O43159 456 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 BNIP3LO60238 219 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 STX10O60499 249 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 RFPL3O75679 317 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 DLDP09622 509 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3HP0C7X1 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 EIF2S3P41091 472 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 SYKP43405 635 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 SLC11A2P49281 568 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBX4P57082 545 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 YWHAEP62258 255 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 C19orf57Q0VDD7 668 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 BST2Q10589 180 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 CDH18Q13634 790 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 ENPP2Q13822 863 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 SLC45A4Q5BKX6 768 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 ADGRF1Q5T601 910 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3GQ6DHY5 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3CQ6IPX1 549 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 ADIPOR2Q86V24 386 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 SMYD4Q8IYR2 804 aaPredicted RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 TBC1D3Q8IZP1 549 aaPredicted RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 CFAP52Q8N1V2 620 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 TTC39CQ8N584 583 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 ANKRD52Q8NB46 1076 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 FBXL13Q8NEE6 735 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 OR14C36Q8NHC7 312 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 BAHD1Q8TBE0 780 aaPredicted RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 WFDC5Q8TCV5 224 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 NAF1Q96HR8 494 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 SERAC1Q96JX3 654 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 PCED1AQ9H1Q7 454 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 PABPC3Q9H361 631 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 SCUBE2Q9NQ36 999 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 RAB20Q9NX57 234 aa8.58□□□□□ -1.04
SNF8-204ENST00000506104 HBS1LQ9Y450 684 aaKnown RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 MUC22E2RYF6 1773 aaPredicted RBP8.58□□□□□ -1.04
SNF8-204ENST00000506104 KNTC1P50748 2209 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 SYNJ2BP-COX16A0A087WUM0 186 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 YJEFN3A6XGL0 299 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 TTC34A8MYJ7 566 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 E7ENQ6 273 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 M0QYV0 167 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 XPO1O14980 1071 aaKnown RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 CETN3O15182 167 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 SIN3BO75182 1162 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 MOCS3O95396 460 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 CALCAP01258 141 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 IGLV3-19P01714 112 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 CD38P28907 300 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 MAT2AP31153 395 aaKnown RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 SLC6A4P31645 630 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 CSKP41240 450 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 CTSKP43235 329 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ARRB1P49407 418 aaPredicted RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 GALCP54803 685 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 CCDC173Q0VFZ6 552 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 TARDBPQ13148 414 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNF8-204ENST00000506104 PTPRNQ16849 979 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 POM121L1PQ3SYA9 428 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms