RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NRSN2Q9GZP1 204 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 NIF3L1Q9GZT8 377 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 PABPC3Q9H361 631 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 CUEDC2Q9H467 287 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 FBRSQ9HAH7 460 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 EBF2Q9HAK2 575 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 APOBEC3GQ9HC16 384 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 STIM2Q9P246 746 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 CGNQ9P2M7 1197 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SERGEFQ9UGK8 458 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SFMBT1Q9UHJ3 866 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 USP3Q9Y6I4 520 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 GCN1Q92616 2671 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 COL5A1P20908 1838 aaPredicted RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 WNT9AO14904 365 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SPTLC2O15270 562 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 YKT6O15498 198 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 PAPSS1O43252 624 aaPredicted RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TBL1XO60907 577 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 RNASEH1O60930 286 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SIN3BO75182 1162 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 NR3C1P04150 777 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 RPN1P04843 607 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 ATP5BP06576 529 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 POLR2EP19388 210 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SYT1P21579 422 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 GLDCP23378 1020 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CD38P28907 300 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 ACTN2P35609 894 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 GCLMP48507 274 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 PSMD8P48556 350 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 ARRB1P49407 418 aaPredicted RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 NUMBP49757 651 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TKTL1P51854 596 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 ST8SIA6P61647 398 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CLDN10P78369 228 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 KCNH2Q12809 1159 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 BNIP3Q12983 259 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CUL4BQ13620 913 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TRIP4Q15650 581 aaPredicted RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CST6Q15828 149 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TBC1D25Q3MII6 688 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SHC4Q6S5L8 630 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 PCSK4Q6UW60 755 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 MMAAQ8IVH4 418 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 FAM217AQ8IXS0 508 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 GRAMD1CQ8IYS0 662 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CCDC150Q8NCX0 1101 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 LSM14AQ8ND56 463 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 WFDC5Q8TCV5 224 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TAS1R2Q8TE23 839 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SAP25Q8TEE9 199 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 RNF139Q8WU17 664 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TAF4BQ92750 862 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 TMA16Q96EY4 203 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SERAC1Q96JX3 654 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 HEXIM2Q96MH2 286 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 OMDQ99983 421 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 DNAI2Q9GZS0 605 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 RSPH9Q9H1X1 276 aaPredicted RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 NEUROG2Q9H2A3 272 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 UPF2Q9HAU5 1272 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CPNE5Q9HCH3 593 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 EXOC1Q9NV70 894 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 SUN2Q9UH99 717 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 CLCA2Q9UQC9 943 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 PTPRQQ9UMZ3 2332 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 ITPR1Q14643 2758 aa7.18□□□□□ -1.26
NPIPB3-203ENST00000504841 KNTC1P50748 2209 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 GOLGA6L7A0A1B0GV03 622 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 A0A1W2PR77 199 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 LRRC72A6NJI9 287 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 TULP2O00295 520 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 POLR2DO15514 142 aaKnown RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 ZBED1O96006 694 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 MPOP05164 745 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 CENPBP07199 599 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 C1SP09871 688 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 CDK4P11802 303 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 KRT10P13645 584 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 NASPP49321 788 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 VAMP7P51809 220 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC8A3P57103 927 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 NXPH1P58417 271 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 DAB2P98082 770 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 ADIGQ0VDE8 80 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 LY6DQ14210 128 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 GOLGA7BQ2TAP0 167 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 FOXD4L6Q3SYB3 417 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC45A4Q5BKX6 768 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 ARHGAP40Q5TG30 622 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 FOXD4L5Q5VV16 416 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 ERICH6BQ5W0A0 696 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 CNNM4Q6P4Q7 775 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 RFWD3Q6PCD5 774 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 FOXD4L3Q6VB84 417 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 USP30Q70CQ3 517 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 ERICH1Q86X53 443 aa7.17□□□□□ -1.26
NPIPB3-203ENST00000504841 MFN1Q8IWA4 741 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms