RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NECAB3Q96P71 396 aaPredicted RBP10.48□□□□□ -0.73
DDX41-203ENST00000504781 HINFPQ9BQA5 517 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 MAGEB5Q9BZ81 275 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 FOXP3Q9BZS1 431 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 CATSPERBQ9H7T0 1116 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 USP29Q9HBJ7 922 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 ALG13Q9NP73 1137 aaKnown RBP10.48□□□□□ -0.73
DDX41-203ENST00000504781 SAE1Q9UBE0 346 aaPredicted RBP10.48□□□□□ -0.73
DDX41-203ENST00000504781 PPARGC1AQ9UBK2 798 aaKnown RBP10.48□□□□□ -0.73
DDX41-203ENST00000504781 YIPF1Q9Y548 306 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 INSL5Q9Y5Q6 135 aa10.48□□□□□ -0.73
DDX41-203ENST00000504781 KIAA1671Q9BY89 1806 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 MTCL1Q9Y4B5 1905 aaKnown RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 SPTBN5Q9NRC6 3674 aaKnown RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 WASH4PA8MWX3 477 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 H7C0C1 242 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 SGK1O00141 431 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 DCLK1O15075 740 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 FGF10O15520 208 aaPredicted RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 PAGE1O75459 146 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 GLUD1P00367 558 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 APOEP02649 317 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 LRG1P02750 347 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 ERCC2P18074 760 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 POU3F3P20264 500 aaPredicted RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 ACTN2P35609 894 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 RPL21P46778 160 aaKnown RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 ATP5OP48047 213 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 KCNQ1P51787 676 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 TPI1P60174 286 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 DYNLT1P63172 113 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 MRPS25P82663 173 aaKnown RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 EFEMP1Q12805 493 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 SLC10A2Q12908 348 aaPredicted RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 HLTFQ14527 1009 aaKnown RBP eCLIP10.47□□□□□ -0.73
DDX41-203ENST00000504781 PDK1Q15118 436 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 SPDYCQ5MJ68 293 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 ELMSAN1Q6PJG2 1045 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 LRRC31Q6UY01 552 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 CEP128Q6ZU80 1094 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 AENQ8WTP8 325 aaKnown RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 RTP4Q96DX8 246 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 SNF8Q96H20 258 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 PKNOX2Q96KN3 472 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 TMEM121Q9BTD3 319 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 LMAN2LQ9H0V9 348 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 VIPAS39Q9H9C1 493 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 PCDH9Q9HC56 1237 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 ANLNQ9NQW6 1124 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 ENTPD7Q9NQZ7 604 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 ARHGEF4Q9NR80 690 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
DDX41-203ENST00000504781 NFU1Q9UMS0 254 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 SNX24Q9Y343 169 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 HEY1Q9Y5J3 304 aa10.47□□□□□ -0.73
DDX41-203ENST00000504781 PRRC2BQ5JSZ5 2229 aaKnown RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 CHD7Q9P2D1 2997 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 SLC12A8A0AV02 714 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 DRGXA6NNA5 263 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 FAM72CH0Y354 149 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 I6L893 689 aaPredicted RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 MAP2K7O14733 419 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 MTSS1O43312 755 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 GCATO75600 419 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 LRIG2O94898 1065 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 TBX18O95935 607 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 PECAM1P16284 738 aaPredicted RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 PTPN2P17706 415 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 MX2P20592 715 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 DNAJB1P25685 340 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 EPHB2P29323 1055 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 HOXA9P31269 272 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 HOXC13P31276 330 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 SERPINB6P35237 376 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 HARS2P49590 506 aaKnown RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 CLCN4P51793 760 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 CBLBQ13191 982 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 SLC45A4Q5BKX6 768 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 FAM72AQ5TYM5 149 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 NCBP2-AS2Q69YL0 99 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 FAM72DQ6L9T8 149 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 FAM72BQ86X60 149 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 DDX42Q86XP3 938 aaKnown RBP eCLIP10.46□□□□□ -0.73
DDX41-203ENST00000504781 CDKL3Q8IVW4 592 aaPredicted RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 MREGQ8N565 214 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 LEMD2Q8NC56 503 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 TFB1MQ8WVM0 346 aaKnown RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 HLA-CQ95604 372 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 PLD4Q96BZ4 506 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 DDX50Q9BQ39 737 aaKnown RBP10.46□□□□□ -0.73
DDX41-203ENST00000504781 TRIM51Q9BSJ1 452 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 C17orf80Q9BSJ5 609 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 FUT8Q9BYC5 575 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 SIK2Q9H0K1 926 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 TMPRSS4Q9NRS4 437 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 ZDHHC18Q9NUE0 388 aa10.46□□□□□ -0.73
DDX41-203ENST00000504781 DTLQ9NZJ0 730 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms