RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NAPGQ99747 312 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 GPR88Q9GZN0 384 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 DNAI2Q9GZS0 605 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TRPV6Q9H1D0 765 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM124BQ9H5Z6 455 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 AP5S1Q9NUS5 200 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 SEPT11Q9NVA2 429 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 AJAP1Q9UKB5 411 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 PRDM4Q9UKN5 801 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 C2CD2Q9Y426 696 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 PCDHB4Q9Y5E5 795 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 PCDHB2Q9Y5E7 798 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 ASPMQ8IZT6 3477 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 A0A0A6YYK5 440 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ANO9A1A5B4 782 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 MACROD2A1Z1Q3 448 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ANKRD62A6NC57 917 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 DDX3XO00571 662 aaKnown RBP eCLIP5.61□□□□□ -1.511e-7■□□□□ 11
HMGXB4-208ENST00000498325 GRIN2DO15399 1336 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 TLR3O15455 904 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 MBTPS2O43462 519 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CAND2O75155 1236 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ASS1P00966 412 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 KRT19P08727 400 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 DBHP09172 617 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PNMA6AP0CW24 399 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CXCL8P10145 99 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 VAV1P15498 845 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CYP11B1P15538 503 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ZSCAN20P17040 1043 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 FGFR4P22455 802 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 HOXA11P31270 313 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 NOP2P46087 812 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 MYL6P60660 151 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ERVK-21P61565 698 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 NOP14P78316 857 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 RBP5P82980 135 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 RBM10P98175 930 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CDR2Q01850 454 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PTPRJQ12913 1337 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 MYO1EQ12965 1108 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ITGA7Q13683 1181 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PTGISQ16647 500 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF699Q32M78 642 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC10A6Q3KNW5 377 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 TCEAL5Q5H9L2 206 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF667Q5HYK9 610 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 JADE1Q6IE81 842 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 GPR179Q6PRD1 2367 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 TRIM72Q6ZMU5 477 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SERINC5Q86VE9 423 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SYCE1Q8N0S2 351 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PDCL2Q8N4E4 241 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CEP112Q8N8E3 955 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 NAT16Q8N8M0 369 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC43A3Q8NBI5 491 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 TMEM52Q8NDY8 209 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 BEST2Q8NFU1 509 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 LNX1Q8TBB1 728 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PHOSPHO2Q8TCD6 241 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CTNNBL1Q8WYA6 563 aaPredicted RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 KAT5Q92993 513 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 WDR24Q96S15 920 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC9A7Q96T83 725 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PI4K2AQ9BTU6 479 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 MTMR12Q9C0I1 747 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SNTG2Q9NY99 539 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 ITGA11Q9UKX5 1188 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 UBQLN1Q9UMX0 589 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 PIN4Q9Y237 131 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM50BQ9Y247 325 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 NOC2LQ9Y3T9 749 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 JRKLQ9Y4A0 524 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 NUB1Q9Y5A7 615 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 CDY2AQ9Y6F7 541 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 SQORQ9Y6N5 450 aa5.61□□□□□ -1.51
HMGXB4-208ENST00000498325 FASNP49327 2511 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 A0A0U1RQJ8 604 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 LINC01553A4QN01 128 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 MED7O43513 233 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 MOCS3O95396 460 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SLPIP03973 132 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 NCAM1P13591 858 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 PRLRP16471 622 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 ATF7P17544 494 aaPredicted RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 THPOP40225 353 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 CTSKP43235 329 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 GALCP54803 685 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 TNNC1P63316 161 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 GPC5P78333 572 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 PRR5P85299 388 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 MPP2Q14168 576 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 WDR72Q3MJ13 1102 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 BICRALQ6AI39 1079 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 TWF2Q6IBS0 349 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SPOPLQ6IQ16 392 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 TMEM270Q6UE05 265 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM43BQ6ZT52 329 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms