RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 RFWD3Q6PCD5 774 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 KIAA0907Q7Z7F0 614 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 ADIPOR2Q86V24 386 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 CACUL1Q86Y37 369 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 MFN1Q8IWA4 741 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 HJURPQ8NCD3 748 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 CLEC4CQ8WTT0 213 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 CYB5D2Q8WUJ1 264 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 DNASE2BQ8WZ79 361 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 FAM149B1Q96BN6 582 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 FAM81BQ96LP2 452 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 LHX5Q9H2C1 402 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 TMEM245Q9H330 911 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 UBE2TQ9NPD8 197 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 STIM2Q9P246 746 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 SUN2Q9UH99 717 aa12.22□□□□□ -0.45
NUDCD3-211ENST00000497978 GOLGA6L7A0A1B0GV03 622 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 SPAARA0A1B0GVQ0 90 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 BCAT2O15382 392 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 DNTTP04053 509 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 PROS1P07225 676 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 SLC6A4P31645 630 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 GPD2P43304 727 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 SGSHP51688 502 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 ST8SIA6P61647 398 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 NNTQ13423 1086 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 MEA1Q16626 185 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 FAM133BQ5BKY9 247 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 UNQ6494/PRO21346Q6UXR6 183 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 ENOSF1Q7L5Y1 443 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 FAM124AQ86V42 546 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 ZCCHC9Q8N567 271 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 DQX1Q8TE96 717 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 STK32AQ8WU08 396 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 MED15Q96RN5 788 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 SCNM1Q9BWG6 230 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 WASF3Q9UPY6 502 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 CNTN6Q9UQ52 1028 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 TLR6Q9Y2C9 796 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 PCDHB9Q9Y5E1 797 aa12.21□□□□□ -0.45
NUDCD3-211ENST00000497978 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 MAP1BP46821 2468 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 EPG5Q9HCE0 2579 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 H0Y626 953 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 THAP12O43422 761 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 TRIM16O95361 564 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 APOEP02649 317 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 ASLP04424 464 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 CD59P13987 128 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 SPINK2P20155 84 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 CD70P32970 193 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 RPL34P49207 117 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 GRIK2Q13002 908 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 CDH18Q13634 790 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 PTPRNQ16849 979 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 TTC31Q49AM3 519 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 DENND1BQ6P3S1 775 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 IL27RAQ6UWB1 636 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 BEND5Q7L4P6 421 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 CARNMT1Q8N4J0 409 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 ZNF366Q8N895 744 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 FIBINQ8TAL6 211 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 SNX19Q92543 992 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 FCRL2Q96LA5 508 aaPredicted RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 PRSS16Q9NQE7 514 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 NAALADL1Q9UQQ1 740 aa12.2□□□□□ -0.46
NUDCD3-211ENST00000497978 TMEM8BA6NDV4 472 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 C1QTNF9BB2RNN3 333 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 RNASEH1O60930 286 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 MOCS3O95396 460 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 CER1O95813 267 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 MOCS2O96007 188 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 FYNP06241 537 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 C1QTNF9P0C862 333 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 GNA15P30679 374 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 USP8P40818 1118 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 YWHAZP63104 245 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 SFSWAPQ12872 951 aaKnown RBP12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 TEAD4Q15561 434 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 ZNF423Q2M1K9 1284 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 MS4A13Q5J8X5 152 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 ZNF776Q68DI1 518 aaPredicted RBP12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 SMYD5Q6GMV2 418 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 NADSYN1Q6IA69 706 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 TRIM65Q6PJ69 517 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 WFDC5Q8TCV5 224 aa12.19□□□□□ -0.46
NUDCD3-211ENST00000497978 ZNF606Q8WXB4 792 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms