RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 UBE2Q1Q7Z7E8 422 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 CLASRPQ8N2M8 674 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 SRFBP1Q8NEF9 429 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 CPT1BQ92523 772 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 AKAP1Q92667 903 aaKnown RBP eCLIP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 SLC39A13Q96H72 371 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 HIC2Q96JB3 615 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 TRAPPC9Q96Q05 1148 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 WDR24Q96S15 920 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 GDF15Q99988 308 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 HERPUD2Q9BSE4 406 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 KATNAL1Q9BW62 490 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 SORBS1Q9BX66 1292 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 TMEM120AQ9BXJ8 343 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 NUAK2Q9H093 628 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 TAF1DQ9H5J8 278 aaPredicted RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 PRDM16Q9HAZ2 1276 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 TMEM8AQ9HCN3 771 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 LIN7CQ9NUP9 197 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 SLC8A2Q9UPR5 921 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 CNTNAP2Q9UHC6 1331 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 OR2W5A6NFC9 320 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 NPHP1O15259 732 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 INSIG1O15503 277 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 IRAK2O43187 625 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 CTIFO43310 598 aaKnown RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 PRAMEF2O60811 474 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 USP12O75317 370 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 TAF5LO75529 589 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 RPP40O75818 363 aaKnown RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 KRT38O76015 456 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 LARGE1O95461 756 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 DUSP1P28562 367 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 TACR3P29371 465 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 GRK5P34947 590 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 SERPINF1P36955 418 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 HALP42357 657 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 GRK6P43250 576 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 GPC5P78333 572 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 SF3A3Q12874 501 aaKnown RBP eCLIP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 MTAPQ13126 283 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 DNASE1L3Q13609 305 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 KPNB1Q14974 876 aaKnown RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 KRT72Q14CN4 511 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 ADCK5Q3MIX3 580 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 WDR93Q6P2C0 686 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 NFRKBQ6P4R8 1299 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 SYNE3Q6ZMZ3 975 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 PIK3AP1Q6ZUJ8 805 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 RRAGAQ7L523 313 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 TRABD2AQ86V40 505 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 UEVLDQ8IX04 471 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 EXOC8Q8IYI6 725 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 SAMD14Q8IZD0 417 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 OR52L2PQ8NGH6 319 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 TRAPPC12Q8WVT3 735 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 PRR11Q96HE9 360 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 MAGEH1Q9H213 219 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 TP63Q9H3D4 680 aaPredicted RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 FSCN3Q9NQT6 498 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 VPS45Q9NRW7 570 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 ABHD10Q9NUJ1 306 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 PI4KBQ9UBF8 816 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 IPO11Q9UI26 975 aaKnown RBP3.7□□□□□ -1.82
PSPC1-205ENST00000497722 RAB21Q9UL25 225 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 FZD4Q9ULV1 537 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 ZMYM2Q9UBW7 1377 aa3.7□□□□□ -1.82
PSPC1-205ENST00000497722 CCDC187A0A096LP49 1063 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 ALDOAP04075 364 aaKnown RBP3.69□□□□□ -1.82
PSPC1-205ENST00000497722 FGF2P09038 288 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 CTSAP10619 480 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 PCP4P48539 62 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 AARSP49588 968 aaKnown RBP eCLIP3.69□□□□□ -1.82
PSPC1-205ENST00000497722 SLC14A1Q13336 389 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 BIRC3Q13489 604 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 RAPGEF1Q13905 1077 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 FAM110CQ1W6H9 321 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 GLE1Q53GS7 698 aaKnown RBP3.69□□□□□ -1.82
PSPC1-205ENST00000497722 FAM90A2PQ658T7 463 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 MSANTD2Q6P1R3 559 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 ACSM6Q6P461 480 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 ZNF354CQ86Y25 554 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 CACNA2D3Q8IZS8 1091 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 GALNT15Q8N3T1 639 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 ADPRHL1Q8NDY3 354 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 PIGKQ92643 395 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 CUL5Q93034 780 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 ABHD14AQ9BUJ0 271 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 SAYSD1Q9NPB0 183 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 TMEM184CQ9NVA4 438 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 ASNSD1Q9NWL6 643 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 GRHPRQ9UBQ7 328 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 TRPC5Q9UL62 973 aaPredicted RBP3.69□□□□□ -1.82
PSPC1-205ENST00000497722 SLC12A4Q9UP95 1085 aa3.69□□□□□ -1.82
PSPC1-205ENST00000497722 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.68□□□□□ -1.82
PSPC1-205ENST00000497722 TOMM40O96008 361 aa3.68□□□□□ -1.82
PSPC1-205ENST00000497722 CD63P08962 238 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms