RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 GPC4O75487 556 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 RFPL1O75677 317 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 PSMD10O75832 226 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 IL1R2P27930 398 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CASP2P42575 452 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 GPC3P51654 580 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 YWHAZP63104 245 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 GEN1Q17RS7 908 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 UNC5AQ6ZN44 842 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ADGRG6Q86SQ4 1221 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CDR2LQ86X02 465 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ATP6V0A1Q93050 837 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ISOC1Q96CN7 298 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CNDP1Q96KN2 507 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 SNX25Q9H3E2 840 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 TMEM216Q9P0N5 145 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 KRT7P08729 469 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ADRA2BP18089 450 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 GNL1P36915 607 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 AARS2Q5JTZ9 985 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 FAM102AQ5T9C2 384 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 OR6B2Q6IFH4 312 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 Q6ZNX1 250 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 SLC9A9Q8IVB4 645 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 Q8N9G6 341 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 NKD2Q969F2 451 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZNF778Q96MU6 729 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 APBA2Q99767 749 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 PIF1Q9H611 641 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 RBAKQ9NYW8 714 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CCPG1Q9ULG6 757 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 C9JVG2 144 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 RGL2O15211 777 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 MAN1A2O60476 641 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CNOT3O75175 753 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ATE1O95260 518 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 BCL10O95999 233 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CALB1P05937 261 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CHRNGP07510 517 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ERVK-10P10266 1014 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 HDCP19113 662 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 AVPR1AP37288 418 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 PHKA2P46019 1235 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 IREB2P48200 963 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 TPTEP56180 551 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ABCE1P61221 599 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CEACAM7Q14002 265 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ADRM1Q16186 407 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZIK1Q3SY52 487 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ANGEL2Q5VTE6 544 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ADGRF2Q8IZF7 708 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ADCY4Q8NFM4 1077 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 SLC29A1Q99808 456 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZC3H12CQ9C0D7 883 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 CAB39LQ9H9S4 337 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 GPRC5DQ9NZD1 345 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 SIRPGQ9P1W8 387 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 STK39Q9UEW8 545 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 SFMBT1Q9UHJ3 866 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 TBC1D30Q9Y2I9 924 aa10.89□□□□□ -0.67
TRAPPC12-223ENST00000497597 C7orf72A4D263 438 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 TMEM191CA6NGB0 347 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 KRT75O95678 551 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 KDELR1P24390 212 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 ADORA2AP29274 412 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 DLG2Q15700 870 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 CCNYQ8ND76 341 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 MCUQ8NE86 351 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 SLC35B2Q8TB61 432 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 CCDC138Q96M89 665 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 EFHD1Q9BUP0 239 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 DGCR6LQ9BY27 220 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 ING2Q9H160 280 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 CLK4Q9HAZ1 481 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 POLE4Q9NR33 117 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 KCNH7Q9NS40 1196 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 CCDC167Q9P0B6 97 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 CNTN3Q9P232 1028 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 FADS3Q9Y5Q0 445 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 TNS2Q63HR2 1409 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 PRPSAP2O60256 369 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 USP12O75317 370 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 GNAO1P09471 354 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 SNHG28P0DPA3 235 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZNF23P17027 643 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 CD247P20963 164 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 RGS7P49802 495 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 DNASE1L3Q13609 305 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 PIGHQ14442 188 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 GLRA4Q5JXX5 417 aa10.88□□□□□ -0.67
TRAPPC12-223ENST00000497597 DCDC5Q6ZRR9 648 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms