RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	IGSF10	Q6WRI0	2623 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	PTPRJ	Q12913	1337 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	PCDH15	Q96QU1	1955 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	FAM149A	A5PLN7	773 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	WASH3P	C4AMC7	463 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	PRRT4	C9JH25	899 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	GFRA2	O00451	464 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	CACNG3	O60359	315 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	TLR5	O60602	858 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	TACC1	O75410	805 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	GJB2	P29033	226 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	OXTR	P30559	389 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	TUB	P50607	506 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	CASP5	P51878	434 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	SF3A1	Q15459	793 aa	Known RBP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	HLA-B	Q31612	363 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	CACUL1	Q86Y37	369 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	CADM4	Q8NFZ8	388 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	SCAMP5	Q8TAC9	235 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	PIP4K2C	Q8TBX8	421 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	DNASE2B	Q8WZ79	361 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	PRCC	Q92733	491 aa	Predicted RBP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	EPSTI1	Q96J88	318 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	UBL7	Q96S82	380 aa	Predicted RBP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	KCNK16	Q96T55	309 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	B3GNT5	Q9BYG0	378 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	OLFML3	Q9NRN5	406 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	TMEM30A	Q9NV96	361 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	PANK4	Q9NVE7	773 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	DKK4	Q9UBT3	224 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	EIF2B4	Q9UI10	523 aa	Known RBP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	STON1	Q9Y6Q2	735 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	HELZ	P42694	1942 aa	Known RBP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	ANAPC1	Q9H1A4	1944 aa		11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	SETX	Q7Z333	2677 aa	Known RBP	11.42	□□□□□ -0.58
SKAP2-209	ENST00000497511	C9orf172	C9J069	976 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	FAM229A	H3BQW9	127 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	PHACTR2	O75167	634 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	PRB1	P04280	392 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	ZNF883	P0CG24	379 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	FUT11	Q495W5	492 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	HTR3D	Q70Z44	454 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	UCMA	Q8WVF2	138 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	WBP2	Q969T9	261 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	CCDC127	Q96BQ5	260 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	SIPA1	Q96FS4	1042 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	CRELD1	Q96HD1	420 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	KIAA1586	Q9HCI6	787 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	SRA1	Q9HD15	236 aa	Known RBP	11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	TLR8	Q9NR97	1041 aa	Known RBP	11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	WSB2	Q9NYS7	404 aa	Predicted RBP	11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	PLK2	Q9NYY3	685 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	HSPBP1	Q9NZL4	362 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511	NFE2L3	Q9Y4A8	694 aa		11.41	□□□□□ -0.58
SKAP2-209	ENST00000497511		A0A087WV48	116 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511		A0A1B0GVT2	93 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	NDUFB5	O43674	189 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CST3	P01034	146 aa	Predicted RBP	11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	NEFL	P07196	543 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	FAM163B	P0C2L3	166 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	ATP5C1	P36542	298 aa	Known RBP	11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	STAT6	P42226	847 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CHRNA4	P43681	627 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CDH8	P55286	799 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	ARID5A	Q03989	594 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	LARP1B	Q659C4	914 aa	Known RBP	11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CCDC73	Q6ZRK6	1079 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	USP49	Q70CQ1	688 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	BRAP	Q7Z569	592 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	FAM124A	Q86V42	546 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	TMPRSS6	Q8IU80	811 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CCDC65	Q8IXS2	484 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	DNAJC19	Q96DA6	116 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	SMARCD1	Q96GM5	515 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	TNIP3	Q96KP6	325 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CITED4	Q96RK1	184 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	DUSP9	Q99956	384 aa	Known RBP	11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	NUP58	Q9BVL2	599 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	FBXO44	Q9H4M3	255 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	CD248	Q9HCU0	757 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	ITM2C	Q9NQX7	267 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	KRT82	Q9NSB4	513 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	COMMD8	Q9NX08	183 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	SALL4	Q9UJQ4	1053 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	SMC3	Q9UQE7	1217 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	NME7	Q9Y5B8	376 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	PCDHGB2	Q9Y5G2	931 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	URB1	O60287	2271 aa	Known RBP	11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	PLXND1	Q9Y4D7	1925 aa		11.4	□□□□□ -0.58
SKAP2-209	ENST00000497511	ASXL3	Q9C0F0	2248 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511		A6NHS1	94 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	METTL12	A8MUP2	240 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	LOC400499	M0QZD8	3231 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	TNFSF14	O43557	240 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	TNFRSF21	O75509	655 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	TBX18	O95935	607 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	PROC	P04070	461 aa		11.39	□□□□□ -0.59
SKAP2-209	ENST00000497511	HLA-E	P13747	358 aa		11.39	□□□□□ -0.59

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