RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DENND1AQ8TEH3 1009 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 ATP6V0A1Q93050 837 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 RBM18Q96H35 190 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 HRASLS5Q96KN8 279 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 ALPK1Q96QP1 1244 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 NACC1Q96RE7 527 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TMEM209Q96SK2 561 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TUBB6Q9BUF5 446 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TTYH3Q9C0H2 523 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 PFDN4Q9NQP4 134 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TLR8Q9NR97 1041 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 NOP53Q9NZM5 478 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CD207Q9UJ71 328 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CDYLQ9Y232 598 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 KLHL20Q9Y2M5 609 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 ADAM18Q9Y3Q7 739 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 HCFC2Q9Y5Z7 792 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 POMT1Q9Y6A1 747 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 IKBKGQ9Y6K9 419 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 ZMYM3Q14202 1370 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TNIKQ9UKE5 1360 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CARMIL2Q6F5E8 1435 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 FITM1A5D6W6 292 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 C16orf96A6NNT2 1141 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 CXorf49A8MYA2 514 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 A8MZ25 164 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 PSMD14O00487 310 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 CTDSP2O14595 271 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 STX6O43752 255 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 PSPNO60542 156 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 CBFA2T3O75081 653 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 PPFIA2O75334 1257 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 AGFG2O95081 481 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 AMHP03971 560 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 TUBBP07437 444 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 HGFP14210 728 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 NTSR1P30989 418 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 HOXC8P31273 242 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 DGKEP52429 567 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 POLGP54098 1239 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 SLFN5Q08AF3 891 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 LASP1Q14847 261 aaKnown RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 NAA25Q14CX7 972 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 EIF4HQ15056 248 aaKnown RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 WSCD2Q2TBF2 565 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 UBAP2Q5T6F2 1119 aaKnown RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 CDC73Q6P1J9 531 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 SUSD1Q6UWL2 747 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 ZC3H18Q86VM9 953 aaKnown RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF540Q8NDQ6 660 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 DNAJB14Q8TBM8 379 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 DUSP19Q8WTR2 217 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 SEPT1Q8WYJ6 367 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 KLHL29Q96CT2 875 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 REXO5Q96IC2 774 aaKnown RBP6.43□□□□□ -1.38
BRCA1-224ENST00000497488 PPP1R13BQ96KQ4 1090 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 C5orf34Q96MH7 638 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 KLHL32Q96NJ5 620 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 RUNDC3BQ96NL0 473 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 FIZ1Q96SL8 496 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 THAP9Q9H5L6 903 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 MID1IP1Q9NPA3 183 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 SNTG1Q9NSN8 517 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 CDH22Q9UJ99 828 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 OSGIN2Q9Y236 505 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 PCDHA10Q9Y5I2 948 aa6.43□□□□□ -1.38
BRCA1-224ENST00000497488 TRAV34A0A0B4J273 112 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 A4D1N5 150 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 C2orf78A6NCI8 922 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 KRT87PA6NCN2 255 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 MBD3L5A6NJ08 208 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 LDLRAD4O15165 306 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 TXNL1O43396 289 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 SOCS5O75159 536 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 VPS4BO75351 444 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 ITGB2P05107 769 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 ATXN1LP0C7T5 689 aaKnown RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 FSTP19883 344 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 KCNA3P22001 575 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 LRPAP1P30533 357 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 TTKP33981 857 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 MCM7P33993 719 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 CASRP41180 1078 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 LIG4P49917 911 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 TOB1P50616 345 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 SATB1Q01826 763 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 RNASELQ05823 741 aaKnown RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 IKZF1Q13422 519 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 NR1I3Q14994 352 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 CLCA4Q14CN2 919 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PCOLCEQ15113 449 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 TYSND1Q2T9J0 566 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 P3H1Q32P28 736 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PTCHD3Q3KNS1 767 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 FAM111BQ6SJ93 734 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 CD300LDQ6UXZ3 194 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PIK3AP1Q6ZUJ8 805 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 DPP10Q8N608 796 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 IL17RCQ8NAC3 791 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms