RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MCRS1Q96EZ8 462 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 LENG8Q96PV6 779 aaPredicted RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 TWNKQ96RR1 684 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 SEC62Q99442 399 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 EIF2AK1Q9BQI3 630 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 THAP7Q9BT49 309 aaPredicted RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 MECRQ9BV79 373 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 RNF26Q9BY78 433 aaPredicted RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 SAP30LQ9HAJ7 183 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 USP29Q9HBJ7 922 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 VPS45Q9NRW7 570 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 SH3BP4Q9P0V3 963 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 KCND3Q9UK17 655 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 ASAP1Q9ULH1 1129 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 J3KRW8 73 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 PDE8BO95263 885 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 ALDOAP04075 364 aaKnown RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 SLC3A2P08195 630 aaKnown RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 CYP3A4P08684 503 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 TNNT1P13805 278 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 JAK3P52333 1124 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 RPL15P61313 204 aaKnown RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 GPC5P78333 572 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 PSG6Q00889 435 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 CFHR3Q02985 330 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 MAPK7Q13164 816 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 TMEM119Q4V9L6 283 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 LRCH2Q5VUJ6 765 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 KIRREL2Q6UWL6 708 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 TMTC1Q8IUR5 882 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 CPOQ8IVL8 374 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 ESX1Q8N693 406 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 PTGR2Q8N8N7 351 aaPredicted RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 KTI12Q96EK9 354 aaPredicted RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 ABHD16BQ9H3Z7 469 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 CDCP1Q9H5V8 836 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 GGA3Q9NZ52 723 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 IFT80Q9P2H3 777 aaPredicted RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 RAB21Q9UL25 225 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 PNMA2Q9UL42 364 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 TRPC5Q9UL62 973 aaPredicted RBP4.51□□□□□ -1.69
SMC4-225ENST00000497203 SLC12A4Q9UP95 1085 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 FRMD4BQ9Y2L6 1034 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 PCDHB2Q9Y5E7 798 aa4.51□□□□□ -1.69
SMC4-225ENST00000497203 M0QZQ0 153 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 EYA2O00167 538 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 JTBO76095 146 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 FPR3P25089 353 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 RCAN1P53805 252 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 KRTAP10-9P60411 292 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 PDCLQ13371 301 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 DCTN1Q14203 1278 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 DLGAP5Q15398 846 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 MAPRE1Q15691 268 aaKnown RBP4.5□□□□□ -1.69
SMC4-225ENST00000497203 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 RETSATQ6NUM9 610 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 TMEM88Q6PEY1 159 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 C16orf89Q6UX73 402 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.5□□□□□ -1.69
SMC4-225ENST00000497203 ADPRHL1Q8NDY3 354 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 SRFBP1Q8NEF9 429 aaKnown RBP4.5□□□□□ -1.69
SMC4-225ENST00000497203 PPHLN1Q8NEY8 458 aaKnown RBP4.5□□□□□ -1.69
SMC4-225ENST00000497203 HASPINQ8TF76 798 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 VOPP1Q96AW1 172 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 UBN1Q9NPG3 1134 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 ADARB2Q9NS39 739 aaKnown RBP4.5□□□□□ -1.69
SMC4-225ENST00000497203 ABHD10Q9NUJ1 306 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
SMC4-225ENST00000497203 FZD4Q9ULV1 537 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 SUFUQ9UMX1 484 aa4.5□□□□□ -1.69
SMC4-225ENST00000497203 SPATA31A1Q5TZJ5 1347 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 CGB1A6NKQ9 187 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 STX16-NPEPL1H3BU86 382 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 SMIM22K7EJ46 135 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 M0QYT0 321 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 STX16O14662 325 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 PRAMEF2O60811 474 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 PRKCGP05129 697 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 IFIT1P09914 478 aaKnown RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 SLC8A1P32418 973 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 GALNSP34059 522 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 KRT9P35527 623 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 RAE1P78406 368 aaKnown RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMC4-225ENST00000497203 G3BP1Q13283 466 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMC4-225ENST00000497203 CNGA3Q16281 694 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 PROSER3Q2NL68 480 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 RNASE12Q5GAN4 147 aaKnown RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 NAA35Q5VZE5 725 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 ATG16L1Q676U5 607 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 ZNF782Q6ZMW2 699 aaPredicted RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 LINC01465Q8N7H1 131 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 ANKRD44Q8N8A2 993 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 TERB1Q8NA31 727 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 HTRA1Q92743 480 aa4.49□□□□□ -1.69
SMC4-225ENST00000497203 DAZAP1Q96EP5 407 aaKnown RBP4.49□□□□□ -1.69
SMC4-225ENST00000497203 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms