RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FTH1P19P0C7X4 201 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 CD44P16070 742 aaKnown RBP24.15■■□□□ 1.46
COL27A1-208ENST00000494780 SLC6A4P31645 630 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 CD70P32970 193 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 ACSL1P33121 698 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 RPS14P62263 151 aaKnown RBP24.15■■□□□ 1.46
COL27A1-208ENST00000494780 GCNT1Q02742 428 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 ISM2Q6H9L7 571 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 FOXR2Q6PJQ5 311 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 GLRX5Q86SX6 157 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 WFDC5Q8TCV5 224 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 CLEC4CQ8WTT0 213 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 DDX50Q9BQ39 737 aaKnown RBP24.15■■□□□ 1.46
COL27A1-208ENST00000494780 C6orf106Q9H6K1 298 aaPredicted RBP24.15■■□□□ 1.46
COL27A1-208ENST00000494780 IL21RQ9HBE5 538 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 OSGEPQ9NPF4 335 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 MAN1B1Q9UKM7 699 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 PCOLCE2Q9UKZ9 415 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 DNTTP04053 509 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 AFF3P51826 1226 aaKnown RBP24.14■■□□□ 1.45
COL27A1-208ENST00000494780 NUCB2P80303 420 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 HLA-BQ31612 363 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 TTI2Q6NXR4 508 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 MFN1Q8IWA4 741 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 HJURPQ8NCD3 748 aaPredicted RBP24.14■■□□□ 1.45
COL27A1-208ENST00000494780 FIBINQ8TAL6 211 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 SNX19Q92543 992 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 BTBD1Q9H0C5 482 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 TM7SF3Q9NS93 570 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 APOBEC2Q9Y235 224 aaKnown RBP24.14■■□□□ 1.45
COL27A1-208ENST00000494780 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.14■■□□□ 1.45
COL27A1-208ENST00000494780 PCDHGB2Q9Y5G2 931 aa24.14■■□□□ 1.45
COL27A1-208ENST00000494780 TYW5A2RUC4 315 aaKnown RBP24.13■■□□□ 1.45
COL27A1-208ENST00000494780 SEMA4FO95754 770 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 NNTQ13423 1086 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 TTC31Q49AM3 519 aaPredicted RBP24.13■■□□□ 1.45
COL27A1-208ENST00000494780 NADSYN1Q6IA69 706 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 RRAGAQ7L523 313 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 EHBP1Q8NDI1 1231 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 SETD7Q8WTS6 366 aaKnown RBP24.13■■□□□ 1.45
COL27A1-208ENST00000494780 TTC17Q96AE7 1141 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 LMLNQ96KR4 655 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 SERPINB11Q96P15 392 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 MIS12Q9H081 205 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 SGK2Q9HBY8 427 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 STIM2Q9P246 746 aa24.13■■□□□ 1.45
COL27A1-208ENST00000494780 RALYQ9UKM9 306 aaKnown RBP24.13■■□□□ 1.45
COL27A1-208ENST00000494780 FNDC3AQ9Y2H6 1198 aaKnown RBP24.13■■□□□ 1.45
COL27A1-208ENST00000494780 A0A1B0GVT2 93 aa24.12■■□□□ 1.45
COL27A1-208ENST00000494780 SART1O43290 800 aaKnown RBP24.12■■□□□ 1.45
COL27A1-208ENST00000494780 RPL34P49207 117 aaKnown RBP24.12■■□□□ 1.45
COL27A1-208ENST00000494780 CSNK1EP49674 416 aaKnown RBP24.12■■□□□ 1.45
COL27A1-208ENST00000494780 TEAD4Q15561 434 aa24.12■■□□□ 1.45
COL27A1-208ENST00000494780 ZNF776Q68DI1 518 aaPredicted RBP24.12■■□□□ 1.45
COL27A1-208ENST00000494780 KLHL10Q6JEL2 608 aa24.12■■□□□ 1.45
COL27A1-208ENST00000494780 DBX2Q6ZNG2 339 aa24.12■■□□□ 1.45
COL27A1-208ENST00000494780 ARHGEF19Q8IW93 802 aa24.12■■□□□ 1.45
COL27A1-208ENST00000494780 DQX1Q8TE96 717 aaKnown RBP24.12■■□□□ 1.45
COL27A1-208ENST00000494780 FCRL2Q96LA5 508 aaPredicted RBP24.12■■□□□ 1.45
COL27A1-208ENST00000494780 TLR6Q9Y2C9 796 aa24.12■■□□□ 1.45
COL27A1-208ENST00000494780 ASPMQ8IZT6 3477 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 BICDL2A1A5D9 508 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 PPP1R3GB7ZBB8 358 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 CALCAP01258 141 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 ASLP04424 464 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 FYNP06241 537 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 ST8SIA6P61647 398 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 PNPLA1Q8N8W4 532 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 NELFBQ8WX92 580 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 BIRC7Q96CA5 298 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 PRICKLE1Q96MT3 831 aaPredicted RBP24.11■■□□□ 1.45
COL27A1-208ENST00000494780 RSPH9Q9H1X1 276 aaPredicted RBP24.11■■□□□ 1.45
COL27A1-208ENST00000494780 KIAA1522Q9P206 1035 aaPredicted RBP24.11■■□□□ 1.45
COL27A1-208ENST00000494780 SCML1Q9UN30 329 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 CNTN6Q9UQ52 1028 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 SLCO1B1Q9Y6L6 691 aa24.11■■□□□ 1.45
COL27A1-208ENST00000494780 NUMA1Q14980 2115 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 FLRT2O43155 660 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 GNA14O95837 355 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 GPD2P43304 727 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 ACADSBP45954 432 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 GRIA4P48058 902 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 KCNH2Q12809 1159 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 BECN1Q14457 450 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 SUZ12Q15022 739 aaKnown RBP24.1■■□□□ 1.45
COL27A1-208ENST00000494780 KIF19Q2TAC6 998 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 BEND5Q7L4P6 421 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 CCDC117Q8IWD4 279 aaPredicted RBP24.1■■□□□ 1.45
COL27A1-208ENST00000494780 SCUBE3Q8IX30 993 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 KDM1BQ8NB78 822 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 BAHD1Q8TBE0 780 aaPredicted RBP24.1■■□□□ 1.45
COL27A1-208ENST00000494780 MYO19Q96H55 970 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 SLC39A13Q96H72 371 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 TRIM62Q9BVG3 475 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 TM9SF3Q9HD45 589 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 NAALADL1Q9UQQ1 740 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 NCKAP1Q9Y2A7 1128 aa24.1■■□□□ 1.45
COL27A1-208ENST00000494780 PKD1L2Q7Z442 2459 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 BMP6P22004 513 aa24.09■■□□□ 1.45
COL27A1-208ENST00000494780 CD27P26842 260 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms