RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	THBS4	P35443	961 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	CPA2	P48052	419 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	CARS	P49589	748 aa	Known RBP	5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	RIPK4	P57078	832 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	YPEL5	P62699	121 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	GPC5	P78333	572 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	SLMAP	Q14BN4	828 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	KRT72	Q14CN4	511 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	BRD3	Q15059	726 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	NFE2	Q16621	373 aa	Predicted RBP	5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	KIAA0753	Q2KHM9	967 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	LEXM	Q3ZCV2	418 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	ARMC3	Q5W041	872 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	RUSC1-AS1	Q66K80	236 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	CPLX2	Q6PUV4	134 aa	Known RBP	5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	PIP4P1	Q86T03	277 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	ARFGAP1	Q8N6T3	406 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRIML1	Q8N9V2	468 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	MPLKIP	Q8TAP9	179 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZFPM2	Q8WW38	1151 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	TBC1D31	Q96DN5	1066 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	KAZALD1	Q96I82	304 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	ADGRE3	Q9BY15	652 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRIM7	Q9C029	511 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	DIAPH3	Q9NSV4	1193 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZMAT5	Q9UDW3	170 aa	Known RBP	5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	CAPN11	Q9UMQ6	739 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	N6AMT1	Q9Y5N5	214 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	SQOR	Q9Y6N5	450 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	SPATA31A1	Q5TZJ5	1347 aa		5.11	□□□□□ -1.59
CCDC66-222	ENST00000494672	IGKV2D-30	A0A075B6S6	120 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672		F8VZ95	297 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	TULP3	O75386	442 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	SCGB1D2	O95969	90 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	HRG	P04196	525 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	HARS	P12081	509 aa	Known RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	TNNT1	P13805	278 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	IL4R	P24394	825 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	RBL1	P28749	1068 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	NTSR1	P30989	418 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	HOXC13	P31276	330 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	KIF5B	P33176	963 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	GNAL	P38405	381 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	GSC	P56915	257 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	MECOM	Q03112	1051 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	COX10	Q12887	443 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	TRIP12	Q14669	1992 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	KCNAB1	Q14722	419 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	KLHL22	Q53GT1	634 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	SYCP2L	Q5T4T6	812 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	MANEAL	Q5VSG8	457 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	SESTD1	Q86VW0	696 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	RAVER1	Q8IY67	606 aa	Known RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	EFCAB13	Q8IY85	973 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	FSTL5	Q8N475	847 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	FAM156A	Q8NDB6	213 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	APPL2	Q8NEU8	664 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZBTB10	Q96DT7	871 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	RSRC1	Q96IZ7	334 aa	Known RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	FAM81B	Q96LP2	452 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	BAG1	Q99933	345 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	NUAK2	Q9H093	628 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	ARL8B	Q9NVJ2	186 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	QPCTL	Q9NXS2	382 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	BARX2	Q9UMQ3	279 aa	Predicted RBP	5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	ATP6V0A2	Q9Y487	856 aa		5.1	□□□□□ -1.59
CCDC66-222	ENST00000494672	BRD4	O60885	1362 aa	Predicted RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672		A6NNZ2	444 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	KIF3B	O15066	747 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	INPPL1	O15357	1258 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	USP12	O75317	370 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZBED1	O96006	694 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	CRYAB	P02511	175 aa	Known RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	PSG1	P11464	419 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	JAK3	P52333	1124 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	RWDD2B	P57060	319 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZBED6	P86452	979 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	EIF4A2	Q14240	407 aa	Known RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	WTAP	Q15007	396 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	PPP2R5B	Q15173	497 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	TMEM95	Q3KNT9	176 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	FAM133B	Q5BKY9	247 aa	Known RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	EARS2	Q5JPH6	523 aa	Known RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	FAAH2	Q6GMR7	532 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	P3H2	Q8IVL5	708 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	BCAS4	Q8TDM0	211 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	HDAC7	Q8WUI4	952 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	TBC1D20	Q96BZ9	403 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	MSLNL	Q96KJ4	702 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	SPAG5	Q96R06	1193 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	STRBP	Q96SI9	672 aa	Known RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	NACA2	Q9H009	215 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZNHIT6	Q9NWK9	470 aa	Known RBP	5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZNF69	Q9UC07	566 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	ZNF212	Q9UDV6	495 aa		5.09	□□□□□ -1.59
CCDC66-222	ENST00000494672	VPS51	Q9UID3	782 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms