RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TBC1D3KA0A087X1G2 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 GXYLT2A0PJZ3 443 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3BA6NDS4 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3FA6NER0 549 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3LB9A6J9 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 FYB1O15117 783 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 NCAM2O15394 837 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 CTIFO43310 598 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 DHHO43323 396 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 KIF1CO43896 1103 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 PRAMEF2O60811 474 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ZC3H11AO75152 810 aaKnown RBP eCLIP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SGPL1O95470 568 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 CER1O95813 267 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SYF2O95926 243 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 FGBP02675 491 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ENO1P06733 434 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3HP0C7X1 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 AKR1A1P14550 325 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 VEGFAP15692 232 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 KLRK1P26718 216 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 CDC25AP30304 524 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 STAT1P42224 750 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 VPS41P49754 854 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ARL4CP56559 192 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 GEMIN4P57678 1058 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 PROK1P58294 105 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 RAE1P78406 368 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 GOLGA8FQ08AF8 430 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 DDX10Q13206 875 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 STIM1Q13586 685 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 LAMB3Q13751 1172 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 GRM4Q14833 912 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 GPR162Q16538 588 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ANXA2RQ3ZCQ2 193 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 HYIQ5T013 277 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 INTS11Q5TA45 600 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3GQ6DHY5 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3CQ6IPX1 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 MSANTD2Q6P1R3 559 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 CYP26C1Q6V0L0 522 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ZNF793Q6ZN11 406 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 UBE2Q1Q7Z7E8 422 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TRABD2AQ86V40 505 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 CCDC117Q8IWD4 279 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3Q8IZP1 549 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SLC22A17Q8WUG5 538 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 CENPIQ92674 756 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 USP13Q92995 863 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SKA1Q96BD8 255 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 PRR11Q96HE9 360 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 PAAF1Q9BRP4 392 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TMEM79Q9BSE2 394 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 RTKNQ9BST9 563 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 PAGR1Q9BTK6 254 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 UNC45AQ9H3U1 944 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TASP1Q9H6P5 420 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 PAPOLBQ9NRJ5 636 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 RASSF1Q9NS23 344 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ABHD10Q9NUJ1 306 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 LIN7CQ9NUP9 197 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 ZNF70Q9UC06 446 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SUFUQ9UMX1 484 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 VPS4AQ9UN37 437 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SCAF8Q9UPN6 1271 aaKnown RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SPATA31A5Q5VU36 1347 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 SPATA31A7Q8IWB4 1347 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 FNDC1Q4ZHG4 1894 aaPredicted RBP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 CCDC187A0A096LP49 1063 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TCRBV5S1A1TA0A578 114 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TMEM247A6NEH6 219 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 KCNU1A8MYU2 1149 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TISP43B9A030 160 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 J3KRW8 73 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 SOCS2O14508 198 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 PRPF4O43172 522 aaKnown RBP eCLIP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 SEPT4O43236 478 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TULP3O75386 442 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 RPP40O75818 363 aaKnown RBP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ACTL6BO94805 426 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 DHRS4L1P0CG22 281 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ALADP13716 330 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TGM2P21980 687 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 GRK5P34947 590 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ARHGAP25P42331 645 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 CPA2P48052 419 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ALDH7A1P49419 539 aaKnown RBP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 AP2B1P63010 937 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TLE3Q04726 772 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 KPNB1Q14974 876 aaKnown RBP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 RPS6KA2Q15349 733 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 TWIST1Q15672 202 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 BTBD16Q32M84 506 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 MEX3CQ5U5Q3 659 aaKnown RBP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ISM2Q6H9L7 571 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 SULT6B1Q6IMI4 303 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ACSM6Q6P461 480 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 NFRKBQ6P4R8 1299 aa2.67□□□□□ -1.98
LMNB1-207ENST00000494185 ZNF782Q6ZMW2 699 aaPredicted RBP2.67□□□□□ -1.98
LMNB1-207ENST00000494185 DEF8Q6ZN54 512 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms