RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 IGKV6D-41A0A0C4DH26 115 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TEX33O43247 280 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 NRP2O60462 931 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRKD3O94806 890 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 DHRS4L1P0CG22 281 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CALB2P22676 271 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC6A2P23975 617 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ACVR2AP27037 513 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SMARCA1P28370 1054 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTPN7P35236 360 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 COPB2P35606 906 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MDH1P40925 334 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 IARSP41252 1262 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PSMD8P48556 350 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TUBP50607 506 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 NCALDP61601 193 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 UBE4AQ14139 1066 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SEPT2Q15019 361 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 BEAN1Q3B7T3 259 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FILIP1LQ4L180 1135 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 AMOTQ4VCS5 1084 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM102AQ5T9C2 384 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 METRNLQ641Q3 311 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ARL6IP4Q66PJ3 421 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF772Q68DY9 489 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 DUPD1Q68J44 220 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ANO7Q6IWH7 933 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM83AQ86UY5 434 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TDRPQ86YL5 185 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ULK2Q8IYT8 1036 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 RASSF8Q8NHQ8 419 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CUL5Q93034 780 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PAGE5Q96GU1 130 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM193BQ96PV7 902 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 C7orf25Q9BPX7 421 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 NDC1Q9BTX1 674 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ARFGAP3Q9NP61 516 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MKS1Q9NXB0 559 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC23A1Q9UHI7 598 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SCOCQ9UIL1 159 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 HDAC5Q9UQL6 1122 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TTC36A6NLP5 189 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PEX11AO75192 247 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ALOX15P16050 662 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 EEF1GP26641 437 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMOD1P28289 359 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 GABRB3P28472 473 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 KRT9P35527 623 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADD2P35612 726 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 PHKA1P46020 1223 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC6A9P48067 706 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TRAPPC10P48553 1259 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 WNT3AP56704 352 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 NRG3P56975 720 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MAP2K1Q02750 393 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 GIT2Q14161 759 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF280DQ6N043 979 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 C8orf82Q6P1X6 216 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMCO3Q6UWJ1 677 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 B3GNT9Q6UX72 402 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 DOK3Q7L591 496 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 EXOC3L1Q86VI1 746 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMTC1Q8IUR5 882 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CEP57L1Q8IYX8 460 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 TEX9Q8N6V9 391 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCHCR1Q8TD31 782 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF480Q8WV37 535 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 HOXB13Q92826 284 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CYFIP2Q96F07 1278 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CABS1Q96KC9 395 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 UBXN10Q96LJ8 280 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 JAKMIP1Q96N16 626 aaKnown RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZIM3Q96PE6 472 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MTMR9Q96QG7 549 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCSER1Q9C0I3 900 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF385DQ9H6B1 395 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 HAUS4Q9H6D7 363 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 RGS17Q9UGC6 210 aaPredicted RBP2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 SMC3Q9UQE7 1217 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MIA3Q5JRA6 1907 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYO3BQ8WXR4 1341 aa2.73□□□□□ -1.97
CDC42EP3-205ENST00000494083 GOLGA8AA7E2F4 631 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 TBKBP1A7MCY6 615 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 CXorf49A8MYA2 514 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRR5-ARHGAP8B1AHC4 643 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SPDEFO95238 335 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PCP11498 1178 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 RARGP13631 454 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 BMP5P22003 454 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 HOXD13P35453 343 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 KRT31Q15323 416 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM173BQ6P4H8 233 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 GADL1Q6ZQY3 521 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM43BQ6ZT52 329 aaPredicted RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 C15orf52Q6ZUT6 534 aaKnown RBP2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SDR16C5Q8N3Y7 309 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLC44A3Q8N4M1 653 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPM1NQ8N819 430 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 NECAB1Q8N987 351 aa2.72□□□□□ -1.97
CDC42EP3-205ENST00000494083 NRG4Q8WWG1 115 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms