RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SCN1AP35498 2009 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CLCN7P51798 805 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 NDST1P52848 882 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 GSCP56915 257 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 KRT17Q04695 432 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PRKCQQ04759 706 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 FZD5Q13467 585 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PTK6Q13882 451 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PDCD11Q14690 1871 aaKnown RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CCDC142Q17RM4 750 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 DCAF4L1Q3SXM0 396 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 XKR4Q5GH76 650 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 UBXN11Q5T124 520 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CCSAPQ6IQ19 270 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 SLC27A1Q6PCB7 646 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 DCUN1D2Q6PH85 259 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 LCLAT1Q6UWP7 414 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 KDM7AQ6ZMT4 941 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 UBA3Q8TBC4 463 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 UBLCP1Q8WVY7 318 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 DNAJB3Q8WWF6 145 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 C18orf25Q96B23 403 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 SEC16BQ96JE7 1060 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 SCYL1Q96KG9 808 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 MCEEQ96PE7 176 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CPXM1Q96SM3 734 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 FMO2Q99518 471 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 MRPL45Q9BRJ2 306 aaKnown RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 TMEM109Q9BVC6 243 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 CAPS2Q9BXY5 557 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 FAM129AQ9BZQ8 928 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 FAM49AQ9H0Q0 323 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 FAM124BQ9H5Z6 455 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 HOMER3Q9NSC5 361 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 KLHL11Q9NVR0 708 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 GEMIN8Q9NWZ8 242 aaKnown RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 SLC5A4Q9NY91 659 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 LCMT1Q9UIC8 334 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 ITGA11Q9UKX5 1188 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 STRIP2Q9ULQ0 834 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 BARX2Q9UMQ3 279 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-213ENST00000494016 ATP8A1Q9Y2Q0 1164 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 PTPN22Q9Y2R2 807 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 Q9Y3F1 56 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 TRIM17Q9Y577 477 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 COL6A3P12111 3177 aa6.29□□□□□ -1.4
CPSF7-213ENST00000494016 RALGAPA2Q2PPJ7 1873 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 hCG_1818297A0A087WSY0 165 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 GOLGA8SH3BPF8 625 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 PIRO00625 290 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CAND2O75155 1236 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 ERLIN2O94905 339 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 ENDOD1O94919 500 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TRUB2O95900 331 aaKnown RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 HMGCRP04035 888 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 MYL3P08590 195 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 NUDT17P0C025 328 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 MYZAPP0CAP1 466 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 KRT3P12035 628 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 RARGP13631 454 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 P4HA1P13674 534 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 ETS1P14921 441 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 IL1R2P27930 398 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 AXLP30530 894 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 HOXC8P31273 242 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 PTPN7P35236 360 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CHKAP35790 457 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CCNFP41002 786 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CDKN2BP42772 138 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 SSR1P43307 286 aaKnown RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 PSMC1P62191 440 aaKnown RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 BEX3Q00994 111 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 SLC25A11Q02978 314 aaKnown RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 SLC29A2Q14542 456 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 PCBP1Q15365 356 aaKnown RBP eCLIP6.28□□□□□ -1.41e-7■■■□□ 18.3
CPSF7-213ENST00000494016 TRIP13Q15645 432 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 ZSCAN26Q16670 478 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 RAB6CQ53S08 254 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TNFAIP8L3Q5GJ75 292 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TTC19Q6DKK2 380 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TRNP1Q6NT89 227 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 DRICH1Q6PGQ1 229 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CATSPER4Q7RTX7 472 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 LIMS2Q7Z4I7 341 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 PRUNE1Q86TP1 453 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TLK2Q86UE8 772 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 WFDC3Q8IUB2 231 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CCDC50Q8IVM0 306 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 EMC1Q8N766 993 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TRPV1Q8NER1 839 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 CMASQ8NFW8 434 aaPredicted RBP6.28□□□□□ -1.4
CPSF7-213ENST00000494016 FNIP1Q8TF40 1166 aa6.28□□□□□ -1.4
CPSF7-213ENST00000494016 TLCD1Q96CP7 247 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms