RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 AGPSO00116 658 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 BIN1O00499 593 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 SLC30A4O14863 429 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CILPO75339 1184 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 KLF8O95600 359 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CALCAP01258 141 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 ADH5P11766 374 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CNR2P34972 360 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 KIR2DL1P43626 348 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 AP3M2P53677 418 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 MCCD1P59942 119 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 INCA1Q0VD86 236 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 BLMHQ13867 455 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 ZRSR2Q15696 482 aaKnown RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 NFIL3Q16649 462 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 SGSM1Q2NKQ1 1148 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 TBC1D25Q3MII6 688 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 ANKRD20A8PQ5CZ79 823 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 HECTD3Q5T447 861 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 PPP1R26Q5T8A7 1209 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CCDC181Q5TID7 509 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 SNX30Q5VWJ9 437 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 BZW1Q7L1Q6 419 aaKnown RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 LMNTD2Q8IXW0 634 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 GALNT15Q8N3T1 639 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 GUF1Q8N442 669 aaKnown RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 MMGT1Q8N4V1 131 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 IL17RCQ8NAC3 791 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 RLN3Q8WXF3 142 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 NDRG1Q92597 394 aaKnown RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 SLITRK1Q96PX8 696 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 KLF16Q9BXK1 252 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 HAUS4Q9H6D7 363 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CTNNAL1Q9UBT7 734 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 MBD1Q9UIS9 605 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CDV3Q9UKY7 258 aaKnown RBP8.52□□□□□ -1.05
HDAC6-234ENST00000493923 SAR1BQ9Y6B6 198 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CEP192Q8TEP8 1941 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 CHD6Q8TD26 2715 aa8.52□□□□□ -1.05
HDAC6-234ENST00000493923 PCNX2A6NKB5 2137 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 NUMA1Q14980 2115 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ADAMTS9Q9P2N4 1935 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PLXND1Q9Y4D7 1925 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 E2F8A0AVK6 867 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 LRRD1A4D1F6 860 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 TRIM49BA6NDI0 452 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PRR5-ARHGAP8B1AHC4 643 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PATE3B3GLJ2 98 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 TM4SF5O14894 197 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 MAPK13O15264 365 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CALUO43852 315 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 TLR5O60602 858 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 LRP3O75074 770 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ATG13O75143 517 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 KAT7O95251 611 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ATP6V1G2O95670 118 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 APBB3O95704 486 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PFKLP17858 780 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CCND1P24385 295 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ERCC5P28715 1186 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 WASP42768 502 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PRCPP42785 496 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PPP3CCP48454 512 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 DGKEP52429 567 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 VAV2P52735 878 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 MRPS35P82673 323 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ARHGAP8P85298 464 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 NR1H3Q13133 447 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ADAM9Q13443 819 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 LBRQ14739 615 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 FBXO43Q4G163 708 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CBWD6Q4V339 395 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ZNF394Q53GI3 561 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CBWD3Q5JTY5 395 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CBWD5Q5RIA9 395 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PAPD7Q5XG87 772 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ANO7Q6IWH7 933 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ZNF572Q7Z3I7 529 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 UNC93AQ86WB7 457 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CACNA2D3Q8IZS8 1091 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 MREGQ8N565 214 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CAMKK1Q8N5S9 505 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 SLC4A11Q8NBS3 891 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 MDGA1Q8NFP4 955 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CFAP61Q8NHU2 1237 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 B4GALNT2Q8NHY0 566 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 OVCA2Q8WZ82 227 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 TAF4BQ92750 862 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CYFIP2Q96F07 1278 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 THOC1Q96FV9 657 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ZC3H10Q96K80 434 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 TNIP3Q96KP6 325 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CCT8L2Q96SF2 557 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ACOX2Q99424 681 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 HNRNPABQ99729 332 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms