RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 AFF3P51826 1226 aaKnown RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 PMS1P54277 932 aaKnown RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 RPS14P62263 151 aaKnown RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 FKBP3Q00688 224 aaKnown RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 ZBTB16Q05516 673 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 MPP7Q5T2T1 576 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 ZNF658Q5TYW1 1059 aaPredicted RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 MBLAC2Q68D91 279 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 LCLAT1Q6UWP7 414 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 WFDC5Q8TCV5 224 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 SNX19Q92543 992 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 ERCC4Q92889 916 aaPredicted RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 TSG101Q99816 390 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 PLXNA2O75051 1894 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 NYNRINQ9P2P1 1898 aaKnown RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 GABBR2O75899 941 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 DLDP09622 509 aaKnown RBP20.7■□□□□ 0.9
NELFE-212ENST00000492539 LCP1P13796 627 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 KIF19Q2TAC6 998 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 PIK3R6Q5UE93 754 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 ANKRD40Q6AI12 368 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 SLC35F5Q8WV83 523 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 IRGQQ8WZA9 623 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 TFAP2BQ92481 460 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 GTPBP4Q9BZE4 634 aaKnown RBP20.7■□□□□ 0.9
NELFE-212ENST00000492539 BTBD1Q9H0C5 482 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 CELSR3Q9NYQ7 3312 aa20.7■□□□□ 0.9
NELFE-212ENST00000492539 SEMA4FO95754 770 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 DNTTP04053 509 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 ATP5BP06576 529 aaKnown RBP20.69■□□□□ 0.9
NELFE-212ENST00000492539 PAEPP09466 180 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 SLC6A4P31645 630 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 CD70P32970 193 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 GRIA4P48058 902 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 LRMPQ12912 555 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 FAM133BQ5BKY9 247 aaKnown RBP20.69■□□□□ 0.9
NELFE-212ENST00000492539 PMF1Q6P1K2 205 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 RFWD3Q6PCD5 774 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 AZIN2Q96A70 460 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 BIRC7Q96CA5 298 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 MYO19Q96H55 970 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 LMLNQ96KR4 655 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 CDC6Q99741 560 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 ZSWIM1Q9BR11 485 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 TM9SF3Q9HD45 589 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 ARMCX3Q9UH62 379 aaPredicted RBP20.69■□□□□ 0.9
NELFE-212ENST00000492539 SNX11Q9Y5W9 270 aa20.69■□□□□ 0.9
NELFE-212ENST00000492539 GOLGA6L7A0A1B0GV03 622 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 TRIM49BA6NDI0 452 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 IRAK2O43187 625 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 ACSL4O60488 711 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 TBL1XO60907 577 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 RGS7P49802 495 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 LRRC63Q05C16 580 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 COL9A2Q14055 689 aaPredicted RBP20.68■□□□□ 0.9
NELFE-212ENST00000492539 TEAD4Q15561 434 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 TTC31Q49AM3 519 aaPredicted RBP20.68■□□□□ 0.9
NELFE-212ENST00000492539 NUGGCQ68CJ6 796 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 TMEM270Q6UE05 265 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 TMPRSS7Q7RTY8 843 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 UNC45BQ8IWX7 931 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 ZNF557Q8N988 423 aaPredicted RBP20.68■□□□□ 0.9
NELFE-212ENST00000492539 RHBDD1Q8TEB9 315 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 GOLGA1Q92805 767 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 ORAI3Q9BRQ5 295 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 CCDC86Q9H6F5 360 aaKnown RBP20.68■□□□□ 0.9
NELFE-212ENST00000492539 SGK2Q9HBY8 427 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 SUN2Q9UH99 717 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 MAN1B1Q9UKM7 699 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.68■□□□□ 0.9
NELFE-212ENST00000492539 ANKRD6Q9Y2G4 727 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 GPSM3Q9Y4H4 160 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 ACACAQ13085 2346 aa20.68■□□□□ 0.9
NELFE-212ENST00000492539 PMM2O15305 246 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 LTFP02788 710 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 ATXN1LP0C7T5 689 aaKnown RBP20.67■□□□□ 0.9
NELFE-212ENST00000492539 POLR2EP19388 210 aaKnown RBP20.67■□□□□ 0.9
NELFE-212ENST00000492539 CD27P26842 260 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 SLC11A2P49281 568 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 FMO5P49326 533 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 SUZ12Q15022 739 aaKnown RBP20.67■□□□□ 0.9
NELFE-212ENST00000492539 CNGA2Q16280 664 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 ZNF776Q68DI1 518 aaPredicted RBP20.67■□□□□ 0.9
NELFE-212ENST00000492539 NADSYN1Q6IA69 706 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 CLEC4CQ8WTT0 213 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 TTC17Q96AE7 1141 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 PRICKLE1Q96MT3 831 aaPredicted RBP20.67■□□□□ 0.9
NELFE-212ENST00000492539 RSPH9Q9H1X1 276 aaPredicted RBP20.67■□□□□ 0.9
NELFE-212ENST00000492539 CLSTN2Q9H4D0 955 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 BTBD3Q9Y2F9 522 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 APC2O95996 2303 aa20.67■□□□□ 0.9
NELFE-212ENST00000492539 LOC400499M0QZD8 3231 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 RNF225M0QZC1 329 aaPredicted RBP20.66■□□□□ 0.9
NELFE-212ENST00000492539 PIK3R2O00459 728 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 TBX4P57082 545 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 STILQ15468 1287 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 CAMK4Q16566 473 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 USP30Q70CQ3 517 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 MFN1Q8IWA4 741 aa20.66■□□□□ 0.9
NELFE-212ENST00000492539 FIBINQ8TAL6 211 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms