RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GCNT1Q02742 428 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 ADIGQ0VDE8 80 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 STIM1Q13586 685 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 PTPRNQ16849 979 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 HLA-BQ31612 363 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 TTC31Q49AM3 519 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 FNDC3BQ53EP0 1204 aaKnown RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 DCAF17Q5H9S7 520 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 PIK3R6Q5UE93 754 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 LRSAM1Q6UWE0 723 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 CCNI2Q6ZMN8 369 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 CHST9Q7L1S5 443 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 PROSER1Q86XN7 944 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 ZCCHC9Q8N567 271 aaKnown RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 SPRYD3Q8NCJ5 442 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 ENGASEQ8NFI3 743 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 FIBINQ8TAL6 211 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 BAHD1Q8TBE0 780 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 EEF2KMTQ96G04 330 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 DHTKD1Q96HY7 919 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 BTBD1Q9H0C5 482 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 MIR1-1HGQ9H1L0 117 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 CD93Q9NPY3 652 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 TM7SF3Q9NS93 570 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 DKK4Q9UBT3 224 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 SFMBT1Q9UHJ3 866 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 NCKAP1Q9Y2A7 1128 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-212ENST00000492407 MYOFQ9NZM1 2061 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 ASPMQ8IZT6 3477 aa9.5□□□□□ -0.89
HDAC3-212ENST00000492407 TARSL2A2RTX5 802 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 TYW5A2RUC4 315 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 GOLGA6L4A6NEF3 574 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 E9PAM4 449 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 TULP2O00295 520 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 PSMA7O14818 248 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 ACSL4O60488 711 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 TSPAN3O60637 253 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 RNASEH1O60930 286 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 CDK4P11802 303 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 FMO5P49326 533 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 RPS14P62263 151 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 BNC1Q01954 994 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 PNOCQ13519 176 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 ZKSCAN8Q15776 578 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 MBLAC2Q68D91 279 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 ZNF776Q68DI1 518 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 PMF1Q6P1K2 205 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 TMEM270Q6UE05 265 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 TMPRSS7Q7RTY8 843 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 MTERF4Q7Z6M4 381 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 CCDC117Q8IWD4 279 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 SMYD4Q8IYR2 804 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 GALNT15Q8N3T1 639 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 HJURPQ8NCD3 748 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 OR2I1PQ8NGU4 316 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 UBA3Q8TBC4 463 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 SORCS1Q8WY21 1168 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 EDEM1Q92611 657 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 SMARCE1Q969G3 411 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 IGSF8Q969P0 613 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 SKA1Q96BD8 255 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 LMLNQ96KR4 655 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 CAMK1GQ96NX5 476 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 SERPINB11Q96P15 392 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 NT5C1BQ96P26 610 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 RSPH9Q9H1X1 276 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 PRSS16Q9NQE7 514 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 ABCB8Q9NUT2 735 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 EIF2B4Q9UI10 523 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 TLR6Q9Y2C9 796 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 ASCC3Q8N3C0 2202 aaKnown RBP9.49□□□□□ -0.89
HDAC3-212ENST00000492407 PCNX2A6NKB5 2137 aa9.49□□□□□ -0.89
HDAC3-212ENST00000492407 MYO18AQ92614 2054 aaKnown RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 TNFSF14O43557 240 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 SEMA4FO95754 770 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 GNA14O95837 355 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 LTFP02788 710 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 LCP1P13796 627 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 ACSL1P33121 698 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 ACADSBP45954 432 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 TBX4P57082 545 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 MTA1Q13330 715 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 SLC12A1Q13621 1099 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 HNRNPA1L2Q32P51 320 aaKnown RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 INAVAQ3KP66 663 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 FAM133BQ5BKY9 247 aaKnown RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 LMO3Q8TAP4 145 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 SETD7Q8WTS6 366 aaKnown RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 TFAP2BQ92481 460 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 NDRG1Q92597 394 aaKnown RBP9.48□□□□□ -0.89
HDAC3-212ENST00000492407 BIRC7Q96CA5 298 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 FAM81BQ96LP2 452 aa9.48□□□□□ -0.89
HDAC3-212ENST00000492407 CCDC86Q9H6F5 360 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms