RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 COL5A1P20908 1838 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 SMG1Q96Q15 3661 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 LOC400499M0QZD8 3231 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 VILLO15195 856 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 IRAK2O43187 625 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 SEMA4FO95754 770 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 ATP5BP06576 529 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CDK4P11802 303 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 PABPC1P11940 636 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 HLA-EP13747 358 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 BMP6P22004 513 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CCT8P50990 548 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 RACK1P63244 317 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 ARID5AQ03989 594 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 BST2Q10589 180 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 COL28A1Q2UY09 1125 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CBWD6Q4V339 395 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 ZNF394Q53GI3 561 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CBWD3Q5JTY5 395 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CBWD5Q5RIA9 395 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 PIK3R6Q5UE93 754 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 BSPRYQ5W0U4 402 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 MBLAC2Q68D91 279 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 ANKRD40Q6AI12 368 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 C19orf48Q6RUI8 117 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CHST9Q7L1S5 443 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 FMNL3Q8IVF7 1028 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 UBR7Q8N806 425 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 PDCD7Q8N8D1 485 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 MDM1Q8TC05 714 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 TATDN2Q93075 761 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 TTC17Q96AE7 1141 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 SCAND2PQ9GZW5 306 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CNGB3Q9NQW8 809 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 ABCC13Q9NSE7 274 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 ABCB8Q9NUT2 735 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 GGA2Q9UJY4 613 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 TPX2Q9ULW0 747 aaKnown RBP8.8□□□□□ -1
APOBEC3F-204ENST00000491387 BTBD3Q9Y2F9 522 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 RAXQ9Y2V3 346 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 PCDHGA1Q9Y5H4 931 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 SNX11Q9Y5W9 270 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 CELSR3Q9NYQ7 3312 aa8.8□□□□□ -1
APOBEC3F-204ENST00000491387 SETXQ7Z333 2677 aaKnown RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 A0A1B0GTQ1 180 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 TRABD2BA6NFA1 517 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 YJEFN3A6XGL0 299 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 E7ENQ6 273 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 H0Y8X5 98 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 TULP2O00295 520 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 O00370 1275 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 PMM2O15305 246 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 DNTTP04053 509 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 ASLP04424 464 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 IGHV4-34P06331 123 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 C1SP09871 688 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 SETSIPP0DME0 302 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 VDRP11473 427 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 DAOAP59103 153 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 CUL2Q13617 745 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 GOLGA7BQ2TAP0 167 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 HNRNPA1L2Q32P51 320 aaKnown RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 INAVAQ3KP66 663 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 TTC31Q49AM3 519 aaPredicted RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 COBLL1Q53SF7 1204 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 SGO2Q562F6 1265 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 FAM133BQ5BKY9 247 aaKnown RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 KCNT1Q5JUK3 1230 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 NUGGCQ68CJ6 796 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 ZNF776Q68DI1 518 aaPredicted RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 KIAA0895LQ68EN5 471 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 FAM124AQ86V42 546 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 TMPRSS12Q86WS5 348 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 UNC45BQ8IWX7 931 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 FIBINQ8TAL6 211 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 RNF139Q8WU17 664 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 CYB5D2Q8WUJ1 264 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 IRGQQ8WZA9 623 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 NDRG1Q92597 394 aaKnown RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 MYO19Q96H55 970 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 PABPC3Q9H361 631 aaKnown RBP8.79□□□□□ -1
APOBEC3F-204ENST00000491387 LRRC4Q9HBW1 653 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 HESX1Q9UBX0 185 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 ADAMTS1Q9UHI8 967 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 MAN1B1Q9UKM7 699 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 TSPAN16Q9UKR8 245 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
APOBEC3F-204ENST00000491387 KALRNO60229 2985 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 A0A1W2PPC4 97 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 TARSL2A2RTX5 802 aaKnown RBP8.78□□□□□ -1
APOBEC3F-204ENST00000491387 BIN1O00499 593 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 CETN3O15182 167 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 SLC16A3O15427 465 aaKnown RBP8.78□□□□□ -1
APOBEC3F-204ENST00000491387 GABBR2O75899 941 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 PAEPP09466 180 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 POLR2EP19388 210 aaKnown RBP8.78□□□□□ -1
APOBEC3F-204ENST00000491387 CD70P32970 193 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 SLC11A2P49281 568 aa8.78□□□□□ -1
APOBEC3F-204ENST00000491387 CCR5P51681 352 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms