RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	NAF1	Q96HR8	494 aa	Known RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	ZNF578	Q96N58	590 aa	Predicted RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TWNK	Q96RR1	684 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	OMD	Q99983	421 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	NEUROG2	Q9H2A3	272 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	EBF2	Q9HAK2	575 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	CYP3A43	Q9HB55	503 aa		20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	TPX2	Q9ULW0	747 aa	Known RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334	MORC2	Q9Y6X9	1032 aa	Predicted RBP	20.08	■□□□□ 0.81
CDK5RAP2-218	ENST00000491334		A0A1W2PR77	199 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SLFN14	P0C7P3	912 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	CCR5	P51681	352 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ST8SIA6	P61647	398 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	YWHAG	P61981	247 aa	Known RBP eCLIP	20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	INSM1	Q01101	510 aa	Predicted RBP	20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SPOPL	Q6IQ16	392 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SV2A	Q7L0J3	742 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	UBXN6	Q9BZV1	441 aa		20.07	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MT-CO3	P00414	261 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PDC	P20941	246 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ACP1	P24666	158 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	NXPH1	P58417	271 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ADGRF1	Q5T601	910 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SFMBT2	Q5VUG0	894 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	KDM7A	Q6ZMT4	941 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	UNC13D	Q70J99	1090 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	DHX40	Q8IX18	779 aa	Known RBP	20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SERAC1	Q96JX3	654 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	C7orf25	Q9BPX7	421 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	IMPG2	Q9BZV3	1241 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	CPNE5	Q9HCH3	593 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	OLA1	Q9NTK5	396 aa	Known RBP	20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	STOML2	Q9UJZ1	356 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	FZD4	Q9ULV1	537 aa		20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ARID1B	Q8NFD5	2236 aa	Predicted RBP	20.06	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334		A0A1W2PP55	124 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	IKBKB	O14920	756 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	RNASEH2A	O75792	299 aa	Known RBP	20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	WISP1	O95388	367 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	DLG4	P78352	724 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	KCNJ12	Q14500	433 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	CST6	Q15828	149 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	E2F4	Q16254	413 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	FAM173B	Q6P4H8	233 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ZC3H3	Q8IXZ2	948 aa	Known RBP	20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ZNF557	Q8N988	423 aa	Predicted RBP	20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	IQUB	Q8NA54	791 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	HIC2	Q96JB3	615 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	HEXIM2	Q96MH2	286 aa	Known RBP	20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SLC39A2	Q9NP94	309 aa		20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	HBS1L	Q9Y450	684 aa	Known RBP	20.05	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PIEZO2	Q9H5I5	2752 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	WNT9A	O14904	365 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MID1	O15344	667 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MAGEC1	O60732	1142 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	LATS1	O95835	1130 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	HLA-DRA	P01903	254 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PIK3CA	P42336	1068 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SLC8A3	P57103	927 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	EHHADH	Q08426	723 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	LY6D	Q14210	128 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MPP7	Q5T2T1	576 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MFSD2A	Q8NA29	543 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	TMC2	Q8TDI7	906 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	RNF139	Q8WU17	664 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SEMA4C	Q9C0C4	833 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MTG2	Q9H4K7	406 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	DMAC2	Q9NW81	257 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SERGEF	Q9UGK8	458 aa		20.04	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SIN3B	O75182	1162 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	CD2BP2	O95400	341 aa	Known RBP	20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	CD58	P19256	250 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SLC8A1	P32418	973 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	HNRNPA1L2	Q32P51	320 aa	Known RBP	20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PROX2	Q3B8N5	592 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	KMT5B	Q4FZB7	885 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SND1	Q7KZF4	910 aa	Known RBP eCLIP	20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	KANSL1	Q7Z3B3	1105 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	SLC9A9	Q8IVB4	645 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MMAA	Q8IVH4	418 aa	Known RBP	20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	DHX58	Q96C10	678 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	MED8	Q96G25	268 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	DPH1	Q9BZG8	443 aa		20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	IRX2	Q9BZI1	471 aa	Predicted RBP	20.03	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ZBED1	O96006	694 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ASL	P04424	464 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	GOT1	P17174	413 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	CD70	P32970	193 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	TKTL1	P51854	596 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ERVPABLB-1	P60509	514 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	VAC14	Q08AM6	782 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ZNF211	Q13398	564 aa	Predicted RBP	20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	ARID5B	Q14865	1188 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	HS1BP3	Q53T59	392 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	RAB41	Q5JT25	222 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PM20D1	Q6GTS8	502 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	PIGZ	Q86VD9	579 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	OR14C36	Q8NHC7	312 aa		20.02	■□□□□ 0.8
CDK5RAP2-218	ENST00000491334	TMEM174	Q8WUU8	243 aa		20.02	■□□□□ 0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms