RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 LHX5Q9H2C1 402 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 STIM2Q9P246 746 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 EIF2B4Q9UI10 523 aaKnown RBP16.33■□□□□ 0.2
SMPD4-220ENST00000491319 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 NFE2L3Q9Y4A8 694 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMPD4-220ENST00000491319 PLXNB3Q9ULL4 1909 aa16.33■□□□□ 0.2
SMPD4-220ENST00000491319 METTL12A8MUP2 240 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 GNA14O95837 355 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 GPD2P43304 727 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 RPL34P49207 117 aaKnown RBP16.32■□□□□ 0.2
SMPD4-220ENST00000491319 MPP7Q5T2T1 576 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 TAC4Q86UU9 113 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 MFN1Q8IWA4 741 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 ASPMQ8IZT6 3477 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-220ENST00000491319 SNX19Q92543 992 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 GATA6Q92908 595 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 SERPINB11Q96P15 392 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
SMPD4-220ENST00000491319 PRSS16Q9NQE7 514 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 CNTN6Q9UQ52 1028 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 NAALADL1Q9UQQ1 740 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 SLCO1B1Q9Y6L6 691 aa16.32■□□□□ 0.2
SMPD4-220ENST00000491319 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 BCAT2O15382 392 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 IRAK2O43187 625 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 SH3BP5O60239 455 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 MOCS2O96007 188 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 DLDP09622 509 aaKnown RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 POLR2EP19388 210 aaKnown RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 ACSL1P33121 698 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 RPS24P62847 133 aaKnown RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 AZIN2Q96A70 460 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 MYO19Q96H55 970 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 SLC39A13Q96H72 371 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 LMLNQ96KR4 655 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 IRX2Q9BZI1 471 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 C6orf106Q9H6K1 298 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 UBE2TQ9NPD8 197 aaPredicted RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 ACP6Q9NPH0 428 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 CYTH4Q9UIA0 394 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 XPO7Q9UIA9 1087 aaKnown RBP16.31■□□□□ 0.2
SMPD4-220ENST00000491319 KLK13Q9UKR3 277 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 TLR6Q9Y2C9 796 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 ZFHX4Q86UP3 3567 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 WDFY3Q8IZQ1 3526 aa16.31■□□□□ 0.2
SMPD4-220ENST00000491319 E5RJQ4 531 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 PAPSS1O43252 624 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-220ENST00000491319 SART1O43290 800 aaKnown RBP16.3■□□□□ 0.2
SMPD4-220ENST00000491319 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
SMPD4-220ENST00000491319 ATP5BP06576 529 aaKnown RBP16.3■□□□□ 0.2
SMPD4-220ENST00000491319 C7P10643 843 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 RPS14P62263 151 aaKnown RBP16.3■□□□□ 0.2
SMPD4-220ENST00000491319 BNC1Q01954 994 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 SLC14A1Q13336 389 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 NNTQ13423 1086 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 SYPL2Q5VXT5 272 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 GJB7Q6PEY0 223 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 NAXDQ8IW45 347 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 CARNMT1Q8N4J0 409 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 C1orf216Q8TAB5 229 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 FIBINQ8TAL6 211 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 CRACR2AQ9BSW2 395 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 ZDHHC5Q9C0B5 715 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 FBRSQ9HAH7 460 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 IL21RQ9HBE5 538 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 INTS6Q9UL03 887 aaKnown RBP16.3■□□□□ 0.2
SMPD4-220ENST00000491319 ZMIZ1Q9ULJ6 1067 aa16.3■□□□□ 0.2
SMPD4-220ENST00000491319 TYW5A2RUC4 315 aaKnown RBP16.29■□□□□ 0.2
SMPD4-220ENST00000491319 THAP12O43422 761 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 GNA15P30679 374 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 CSKP41240 450 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 ACADSBP45954 432 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 PITX1P78337 314 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-220ENST00000491319 APBA1Q02410 837 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 CDH18Q13634 790 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 MS4A13Q5J8X5 152 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 MMS22LQ6ZRQ5 1243 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 CFAP52Q8N1V2 620 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 ZNF557Q8N988 423 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-220ENST00000491319 ZNF606Q8WXB4 792 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 DDX50Q9BQ39 737 aaKnown RBP16.29■□□□□ 0.2
SMPD4-220ENST00000491319 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 PCED1AQ9H1Q7 454 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 GAREM1Q9H706 876 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 TJP2Q9UDY2 1190 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 FNDC3AQ9Y2H6 1198 aaKnown RBP16.29■□□□□ 0.2
SMPD4-220ENST00000491319 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.29■□□□□ 0.2
SMPD4-220ENST00000491319 NEUROG3Q9Y4Z2 214 aa16.29■□□□□ 0.2
SMPD4-220ENST00000491319 A0A1B0GVT2 93 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 BECN2A8MW95 431 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 CAPN9O14815 690 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 MED7O43513 233 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
SMPD4-220ENST00000491319 SEMA4FO95754 770 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms