RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 KCNJ12Q14500 433 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RAB39AQ14964 217 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KARSQ15046 597 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 TBCCQ15814 346 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 EZH2Q15910 746 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 HLFQ16534 295 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 IL17AQ16552 155 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MEA1Q16626 185 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PFKFB3Q16875 520 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC152Q4G0S7 254 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CFAP221Q4G0U5 840 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PARP10Q53GL7 1025 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF362Q5T0B9 420 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 IFIT1BQ5T764 474 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KIAA1614Q5VZ46 1190 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SUMO4Q6EEV6 95 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CENPPQ6IPU0 288 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KLHL10Q6JEL2 608 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 TAPT1Q6NXT6 567 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 VWA1Q6PCB0 445 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 EMBQ6PCB8 327 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 WDR59Q6PJI9 974 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 USP49Q70CQ1 688 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KRT26Q7Z3Y9 468 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 YTHDF3Q7Z739 585 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CROCCP2Q86T23 111 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MICU3Q86XE3 530 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CERS3Q8IU89 383 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC50Q8IVM0 306 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SUGP1Q8IWZ8 645 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 C10orf67Q8IYJ2 551 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 BLIDQ8IZY5 108 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 LNX2Q8N448 690 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SRBD1Q8N5C6 995 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ARFGAP2Q8N6H7 521 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 OTUD6BQ8N6M0 293 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PDPRQ8NCN5 879 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 C3orf20Q8ND61 904 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SPATA4Q8NEY3 305 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 IL17RDQ8NFM7 739 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM76AQ8TAV0 307 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 AFAP1L1Q8TED9 768 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 NELFBQ8WX92 580 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 JADE3Q92613 823 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CALML4Q96GE6 196 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PBKQ96KB5 322 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SH3GL2Q99962 352 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SLF1Q9BQI6 1058 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RHOXF2Q9BQY4 288 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 TUBGCP2Q9BSJ2 902 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CAPS2Q9BXY5 557 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ACTRT3Q9BYD9 372 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD2Q9GZV1 360 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SIK2Q9H0K1 926 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ARMT1Q9H993 441 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MRPL44Q9H9J2 332 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 NHEJ1Q9H9Q4 299 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 A1CFQ9NQ94 594 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PIH1D3Q9NQM4 214 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KLC4Q9NSK0 619 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 EXOC1Q9NV70 894 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 JKAMPQ9P055 326 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 FOXJ2Q9P0K8 574 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CFAP97Q9P2B7 532 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC45A2Q9UMX9 530 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RRP15Q9Y3B9 282 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KIF13AQ9H1H9 1805 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 NID2Q14112 1375 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RTL9Q8NET4 1388 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 COL18A1P39060 1754 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ABCB11O95342 1321 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ATAD5Q96QE3 1844 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC194A0A1B0GVG4 234 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SHTN1A0MZ66 631 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GMNCA6NCL1 334 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6CA6NDK9 693 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6BA6NDN3 693 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRIQ3A6PVS8 624 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 LGALS16A8MUM7 142 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 BTNL10A8MVZ5 291 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ADM5C9JUS6 153 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 AGPSO00116 658 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MGST3O14880 152 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 PRKAB2O43741 272 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 KLRC4O43908 158 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SHOX2O60902 331 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 HSF2BPO75031 334 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC43A1O75387 559 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 KATNA1O75449 491 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ERLIN2O94905 339 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 MBD4O95243 580 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 EYA4O95677 639 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 BAG3O95817 575 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 SERPING1P05155 500 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC172P0C7W6 258 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6DP0CG33 693 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 ZFXP17010 805 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 TRIM21P19474 475 aaKnown RBP2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 RXRAP19793 462 aa2.2□□□□□ -2.06
SNRNP40-207ENST00000491106 C5AR1P21730 350 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms