RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 TPM2P07951 284 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 MYL3P08590 195 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 CCND3P30281 292 aaPredicted RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 ADSSP30520 456 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 PSMC2P35998 433 aaKnown RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 PBX1P40424 430 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 FNTBP49356 437 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 KIF11P52732 1056 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 COPB1P53618 953 aaKnown RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 PTENP60484 403 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 IGBP1P78318 339 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 BEX3Q00994 111 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 ENPEPQ07075 957 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 STRN3Q13033 797 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 CAPSQ13938 189 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 PCBP1Q15365 356 aaKnown RBP eCLIP4.88□□□□□ -1.63
RBM39-235ENST00000490354 MAPK6Q16659 721 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 MAN2A1Q16706 1144 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 FAM187BQ17R55 369 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 HSP90AA4PQ58FG1 418 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TRIM61Q5EBN2 209 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 SPECC1LQ69YQ0 1117 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 SLFN12LQ6IEE8 588 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TAF2Q6P1X5 1199 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 NFRKBQ6P4R8 1299 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TSHZ1Q6ZSZ6 1077 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 RNF180Q86T96 592 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 SESTD1Q86VW0 696 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 RHPN2Q8IUC4 686 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 CREBRFQ8IUR6 639 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 VSTM4Q8IW00 320 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 ZBTB8OSQ8IWT0 167 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 NME8Q8N427 588 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 LRRC71Q8N4P6 559 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 C7orf31Q8N865 590 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 XXYLT1Q8NBI6 393 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 PCSK9Q8NBP7 692 aaKnown RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 RNF149Q8NC42 400 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 DEPTORQ8TB45 409 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 LMBR1Q8WVP7 490 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TRAPPC12Q8WVT3 735 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 EEF2KMTQ96G04 330 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 CNOT6LQ96LI5 555 aaKnown RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 WDR92Q96MX6 357 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 MAP7D2Q96T17 732 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TUBGCP2Q9BSJ2 902 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 KIFC3Q9BVG8 833 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 BOCQ9BWV1 1114 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 VPS16Q9H269 839 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 SETD4Q9NVD3 440 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 POLR3BQ9NW08 1133 aaPredicted RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 KCMF1Q9P0J7 381 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 ARMCX3Q9UH62 379 aaPredicted RBP4.88□□□□□ -1.63
RBM39-235ENST00000490354 SORCS3Q9UPU3 1222 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 FRMD4BQ9Y2L6 1034 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TRIM17Q9Y577 477 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 COL4A3Q01955 1670 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 ITIH6Q6UXX5 1313 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 ADGRA3Q8IWK6 1321 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 ZMYM2Q9UBW7 1377 aa4.88□□□□□ -1.63
RBM39-235ENST00000490354 TCRBV16S1A1N1A0A5B0 115 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 UBA6A0AVT1 1052 aaPredicted RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 C17orf102A2RUQ5 167 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 LRRIQ4A6NIV6 560 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 ANKRD63C9JTQ0 380 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 ACKR2O00590 384 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 DVL2O14641 736 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 HNRNPDLO14979 420 aaKnown RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 CLIC2O15247 247 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 PMM2O15305 246 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 EXOC3O60645 756 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 GPR32O75388 356 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 TOM1L1O75674 476 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 NPTXRO95502 500 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 RPLP2P05387 115 aaKnown RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 ASGR1P07306 291 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 EPB41P11171 864 aaKnown RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 HNRNPLP14866 589 aaKnown RBP eCLIP4.87□□□□□ -1.63
RBM39-235ENST00000490354 MTIF2P46199 727 aaKnown RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 GPC3P51654 580 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 CLCN3P51790 818 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 GSDMDP57764 484 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 POU5F1Q01860 360 aaKnown RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 UBXN1Q04323 297 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 MBTD1Q05BQ5 628 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 TBX2Q13207 712 aaPredicted RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 CCDC40Q4G0X9 1142 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 NAIF1Q69YI7 327 aaPredicted RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 ARMCX5Q6P1M9 558 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 SLC39A4Q6P5W5 647 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 CXCL17Q6UXB2 119 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 INTS8Q75QN2 995 aaKnown RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 CCDC186Q7Z3E2 898 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 SRGAP1Q7Z6B7 1085 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 FGD2Q7Z6J4 655 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 RPAINQ86UA6 219 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 ZNF410Q86VK4 478 aa4.87□□□□□ -1.63
RBM39-235ENST00000490354 CXorf67Q86X51 503 aaPredicted RBP4.87□□□□□ -1.63
RBM39-235ENST00000490354 DRC7Q8IY82 874 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms