RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PM20D1Q6GTS8 502 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 BHLHA9Q7RTU4 235 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 SLC4A11Q8NBS3 891 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 WFDC5Q8TCV5 224 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 PAGE5Q96GU1 130 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 TMEM176AQ96HP8 235 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 PABPC3Q9H361 631 aaKnown RBP14.55□□□□□ -0.08
VARS-227ENST00000489979 EBF2Q9HAK2 575 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 OLA1Q9NTK5 396 aaKnown RBP14.55□□□□□ -0.08
VARS-227ENST00000489979 FBXL12Q9NXK8 326 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 STOML2Q9UJZ1 356 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 PCDHA7Q9UN72 937 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 NCKAP1Q9Y2A7 1128 aa14.55□□□□□ -0.08
VARS-227ENST00000489979 MAPK13O15264 365 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 C1SP09871 688 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 POLR2EP19388 210 aaKnown RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 ABCB4P21439 1286 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 CD70P32970 193 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 ACADVLP49748 655 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 RAD23BP54727 409 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 GALCP54803 685 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 SLC8A3P57103 927 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 FOXD4L6Q3SYB3 417 aaPredicted RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 HES3Q5TGS1 186 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 FOXD4L5Q5VV16 416 aaPredicted RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 ARHGAP17Q68EM7 881 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 NCEH1Q6PIU2 408 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 FOXD4L3Q6VB84 417 aaPredicted RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 USP30Q70CQ3 517 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 INTS8Q75QN2 995 aaKnown RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 EID2Q8N6I1 236 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 ANKRD52Q8NB46 1076 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 SAP25Q8TEE9 199 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 RNF139Q8WU17 664 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 FOXD4L4Q8WXT5 416 aaPredicted RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 EDEM1Q92611 657 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 SKA1Q96BD8 255 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 FCRL3Q96P31 734 aaPredicted RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 RSPH9Q9H1X1 276 aaPredicted RBP14.54□□□□□ -0.08
VARS-227ENST00000489979 CISHQ9NSE2 258 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 SERGEFQ9UGK8 458 aa14.54□□□□□ -0.08
VARS-227ENST00000489979 ARID1BQ8NFD5 2236 aaPredicted RBP14.53□□□□□ -0.08
VARS-227ENST00000489979 RRP8O43159 456 aaKnown RBP14.53□□□□□ -0.08
VARS-227ENST00000489979 MSI1O43347 362 aaKnown RBP14.53□□□□□ -0.08
VARS-227ENST00000489979 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
VARS-227ENST00000489979 TBL1XO60907 577 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 SIN3BO75182 1162 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 LATS1O95835 1130 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 SLFN14P0C7P3 912 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 CDK4P11802 303 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 KRT13P13646 458 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 NR2F2P24468 414 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 ME1P48163 572 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 GOLGA7BQ2TAP0 167 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 BSPRYQ5W0U4 402 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 RFWD3Q6PCD5 774 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 FAM186BQ8IYM0 893 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 SEMA4DQ92854 862 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 MYO19Q96H55 970 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 NRSN2Q9GZP1 204 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 NEUROG2Q9H2A3 272 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 LRRC4Q9HBW1 653 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 TMEM8AQ9HCN3 771 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 AASDHPPTQ9NRN7 309 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 SCML1Q9UN30 329 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 TRAF3IP3Q9Y228 551 aa14.53□□□□□ -0.08
VARS-227ENST00000489979 GOLGA6L7A0A1B0GV03 622 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 A0A1W2PP55 124 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 WNT9AO14904 365 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 XPO1O14980 1071 aaKnown RBP14.52□□□□□ -0.09
VARS-227ENST00000489979 MID1O15344 667 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 PLA2G2AP14555 144 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 CD38P28907 300 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 ADIGQ0VDE8 80 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 RTP5Q14D33 572 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 PIK3R6Q5UE93 754 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 FBXL19Q6PCT2 694 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 DHX40Q8IX18 779 aaKnown RBP14.52□□□□□ -0.09
VARS-227ENST00000489979 TTC39CQ8N584 583 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 BAP1Q92560 729 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 TATDN2Q93075 761 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.09
VARS-227ENST00000489979 GDF3Q9NR23 364 aa14.52□□□□□ -0.09
VARS-227ENST00000489979 A0A1W2PR77 199 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 LRRC72A6NJI9 287 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 YJEFN3A6XGL0 299 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 E7ENQ6 273 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 YKT6O15498 198 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 RNASEH1O60930 286 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 RNASEH2AO75792 299 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 EPHA8P29322 1005 aaPredicted RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 PSMC2P35998 433 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 CSKP41240 450 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 ST8SIA6P61647 398 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 ENPEPQ07075 957 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 SFSWAPQ12872 951 aaKnown RBP14.51□□□□□ -0.09
VARS-227ENST00000489979 BNIP3Q12983 259 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 KCNJ12Q14500 433 aa14.51□□□□□ -0.09
VARS-227ENST00000489979 CST6Q15828 149 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms