RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TPX2Q9ULW0 747 aaKnown RBP7.91□□□□□ -1.14
EXOSC3-206ENST00000489414 AKAP6Q13023 2319 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 A0A0B4J269 797 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 SMCO2A6NFE2 343 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 LRRC72A6NJI9 287 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 EDIL3O43854 480 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 CD2BP2O95400 341 aaKnown RBP7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 CYP11A1P05108 521 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 PDCP20941 246 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 PSMA5P28066 241 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 GNAQP50148 359 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 PMS2P54278 862 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 ITGA1P56199 1179 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 MC1RQ01726 317 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 XKR9Q5GH70 373 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 CHTF18Q8WVB6 975 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 STARD8Q92502 1023 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 C18orf12Q96KH6 178 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 HAPLN3Q96S86 360 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 CMKLR1Q99788 373 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 CCDC94Q9BW85 323 aaPredicted RBP7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 LSG1Q9H089 658 aaKnown RBP7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 GPN2Q9H9Y4 310 aaPredicted RBP7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 SERGEFQ9UGK8 458 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 SLC27A6Q9Y2P4 619 aa7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 OAS3Q9Y6K5 1087 aaKnown RBP7.9□□□□□ -1.14
EXOSC3-206ENST00000489414 ZNF840PA6NDX5 716 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 IFIT3O14879 490 aaKnown RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ZBTB39O15060 712 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 DKC1O60832 514 aaKnown RBP eCLIP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 DDAH1O94760 285 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 INHBBP09529 407 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 TCN2P20062 427 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ADSLP30566 484 aaPredicted RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 DDIT3P35638 169 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ABL2P42684 1182 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 PGDP52209 483 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 OSTNP61366 133 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ADAM8P78325 824 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ZFP36L1Q07352 338 aaKnown RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 KCNMA1Q12791 1236 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 NMIQ13287 307 aaPredicted RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 GEN1Q17RS7 908 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 SLC10A6Q3KNW5 377 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 SEZ6Q53EL9 994 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 C16orf46Q6P387 395 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 SERPINA13PQ6UXR4 307 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 PIK3AP1Q6ZUJ8 805 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 OTUD6AQ7L8S5 288 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ZBTB8OSQ8IWT0 167 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 C4orf19Q8IY42 314 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 UCMAQ8WVF2 138 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 PTPRN2Q92932 1015 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 SENP8Q96LD8 212 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 GFM1Q96RP9 751 aaKnown RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 GLT8D2Q9H1C3 349 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 POLR3FQ9H1D9 316 aaPredicted RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 FBRSQ9HAH7 460 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 TRPM5Q9NZQ8 1165 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 WDR35Q9P2L0 1181 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 SALL4Q9UJQ4 1053 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 NCKAP1Q9Y2A7 1128 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 CYP46A1Q9Y6A2 500 aa7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
EXOSC3-206ENST00000489414 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 SERINC4A6NH21 518 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 AGRPO00253 132 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 EML1O00423 815 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 MSI1O43347 362 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 SPRY1O43609 319 aaPredicted RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 RAD1O60671 282 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 MBL2P11226 248 aaPredicted RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 CYP2F1P24903 491 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 MFAP3P55082 362 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PPP2CBP62714 309 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PPP2CAP67775 309 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 CDK18Q07002 472 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 SFSWAPQ12872 951 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 KRT32Q14532 448 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 E2F5Q15329 346 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PAPD7Q5XG87 772 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 DCP1BQ8IZD4 617 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 LEO1Q8WVC0 666 aaPredicted RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PMEPA1Q969W9 287 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PNPLA2Q96AD5 504 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 INTS4Q96HW7 963 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 TMX3Q96JJ7 454 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PPP1R13BQ96KQ4 1090 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 ZSCAN31Q96LW9 406 aaPredicted RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 BARD1Q99728 777 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 EFHD1Q9BUP0 239 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 TARS2Q9BW92 718 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 BOCQ9BWV1 1114 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 TM6SF1Q9BZW5 370 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 CDT1Q9H211 546 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PABPC3Q9H361 631 aaKnown RBP7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 ABCB6Q9NP58 842 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 MLXIPLQ9NP71 852 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 SEMA3GQ9NS98 782 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms