RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 KLHL40Q2TBA0 621 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 CHST9Q7L1S5 443 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 ZNF677Q86XU0 584 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 LGI2Q8N0V4 545 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 CFAP52Q8N1V2 620 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 WFIKKN2Q8TEU8 576 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 SPAG5Q96R06 1193 aa21.93■■□□□ 1.1
LIME1-207ENST00000489212 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.93■■□□□ 1.1
LIME1-207ENST00000489212 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.93■■□□□ 1.1
LIME1-207ENST00000489212 MUC22E2RYF6 1773 aaPredicted RBP21.92■■□□□ 1.1
LIME1-207ENST00000489212 NPC1O15118 1278 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 TIMM44O43615 452 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 RHOBTB1O94844 696 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 PRKCHP24723 683 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 MATKP42679 507 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 ZNF165P49910 485 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 RNASE9P60153 205 aaKnown RBP21.92■■□□□ 1.1
LIME1-207ENST00000489212 C11orf74Q86VG3 221 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 CHSY1Q86X52 802 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 MFN1Q8IWA4 741 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 ATP6V0D2Q8N8Y2 350 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 FIBINQ8TAL6 211 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 CYB5D2Q8WUJ1 264 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 PRMT1Q99873 361 aaKnown RBP21.92■■□□□ 1.1
LIME1-207ENST00000489212 LAMA1P25391 3075 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 NUP205Q92621 2012 aa21.92■■□□□ 1.1
LIME1-207ENST00000489212 SYCE3A1L190 88 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 SMTNL1A8MU46 457 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 CYP1A1P04798 512 aaPredicted RBP21.91■■□□□ 1.1
LIME1-207ENST00000489212 CCR1P32246 355 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 SCNN1AP37088 669 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 ID4P47928 161 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 LMAN2Q12907 356 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 NME3Q13232 169 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 IQCB1Q15051 598 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 PTPRNQ16849 979 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 FUT11Q495W5 492 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 FSCBQ5H9T9 825 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 PLA2G2CQ5R387 149 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 FAM102AQ5T9C2 384 aaPredicted RBP21.91■■□□□ 1.1
LIME1-207ENST00000489212 MBLAC2Q68D91 279 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 TRNP1Q6NT89 227 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 PRR23CQ6ZRP0 262 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 AHI1Q8N157 1196 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 CARNMT1Q8N4J0 409 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 MRGPRX1Q96LB2 322 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 PCDHB18PQ96TA0 734 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 NPY6RQ99463 290 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 SMOC1Q9H4F8 434 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 CD93Q9NPY3 652 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 RTN4Q9NQC3 1192 aaKnown RBP21.91■■□□□ 1.1
LIME1-207ENST00000489212 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.91■■□□□ 1.1
LIME1-207ENST00000489212 INTS6Q9UL03 887 aaKnown RBP21.91■■□□□ 1.1
LIME1-207ENST00000489212 PCDHGA5Q9Y5G8 931 aa21.91■■□□□ 1.1
LIME1-207ENST00000489212 GOLGA8SH3BPF8 625 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 M0QYT0 321 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 SLC2A3P11169 496 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 HLA-EP13747 358 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 FLT3P36888 993 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 MPLP40238 635 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 LMNB2Q03252 620 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 STARD3Q14849 445 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 RSPO4Q2I0M5 234 aaPredicted RBP21.9■■□□□ 1.1
LIME1-207ENST00000489212 MMS22LQ6ZRQ5 1243 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 RNF34Q969K3 372 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 NT5C3BQ969T7 300 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 SPACA7Q96KW9 195 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 MKRN2Q9H000 416 aaKnown RBP21.9■■□□□ 1.1
LIME1-207ENST00000489212 PIGVQ9NUD9 493 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 SLC12A6Q9UHW9 1150 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 TMEM59LQ9UK28 342 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 CACNA1AO00555 2505 aa21.9■■□□□ 1.1
LIME1-207ENST00000489212 TYW5A2RUC4 315 aaKnown RBP21.89■■□□□ 1.09
LIME1-207ENST00000489212 F5H5T6 163 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 LUC7L3O95232 432 aaKnown RBP21.89■■□□□ 1.09
LIME1-207ENST00000489212 ABCB4P21439 1286 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 CREB5Q02930 508 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 ARID5AQ03989 594 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 SF3A2Q15428 464 aaKnown RBP21.89■■□□□ 1.09
LIME1-207ENST00000489212 SERPINA13PQ6UXR4 307 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 CIR1Q86X95 450 aaPredicted RBP21.89■■□□□ 1.09
LIME1-207ENST00000489212 SLC30A5Q8TAD4 765 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 TBCBQ99426 244 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 TMEM245Q9H330 911 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 ANLNQ9NQW6 1124 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 RRN3Q9NYV6 651 aa21.89■■□□□ 1.09
LIME1-207ENST00000489212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 IGHV1OR15-9A0A0B4J2B8 117 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 BCLAF3A2AJT9 711 aaKnown RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 I6L893 689 aaPredicted RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 ZBTB24O43167 697 aaPredicted RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 EPHX1P07099 455 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 DLDP09622 509 aaKnown RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 ZNF806P0C7X5 589 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 UNGP13051 313 aaPredicted RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 MMP8P22894 467 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 GGCXP38435 758 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 SULT1E1P49888 294 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 CDH18Q13634 790 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 BYSLQ13895 437 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms