RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 LACTBL1A8MY62 500 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 EPHB6O15197 1021 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 CELF2O95319 508 aaKnown RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 CKMP06732 381 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 STARD3Q14849 445 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 NCF4Q15080 339 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 ARHGAP15Q53QZ3 475 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 FBXL16Q8N461 479 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 SPPL2AQ8TCT8 520 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 SYT15Q9BQS2 421 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 LIMD1Q9UGP4 676 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 SNTNA6NMZ2 147 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 ATG7O95352 703 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 INSRRP14616 1297 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 HUNKP57058 714 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 CRADDP78560 199 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 ITGB3BPQ13352 177 aaPredicted RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 NRF1Q16656 503 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 RSBN1Q5VWQ0 802 aaPredicted RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 CYP4Z1Q86W10 505 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 DEFB106AQ8N104 65 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 ADGRE3Q9BY15 652 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 XPNPEP3Q9NQH7 507 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 PTGES3LE9PB15 166 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 OPLAHO14841 1288 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 PHGDHO43175 533 aaKnown RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 ME2P23368 584 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 RRP1BQ14684 758 aaKnown RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 WDR59Q6PJI9 974 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 STK32CQ86UX6 486 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 PCDH20Q8N6Y1 951 aaKnown RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 BHLHE22Q8NFJ8 381 aaPredicted RBP17.99■□□□□ 0.47
NPHP4-209ENST00000489180 TBL1YQ9BQ87 522 aa17.99■□□□□ 0.47
NPHP4-209ENST00000489180 FRMPD4Q14CM0 1322 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 ZNF839A8K0R7 811 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 FAM25AB3EWG3 89 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 FAM25CB3EWG5 89 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 FAM25GB3EWG6 89 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 NCAM2O15394 837 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 TNFAIP8O95379 198 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 CNGA2Q16280 664 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 NBPF12Q5TAG4 269 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-209ENST00000489180 METTL7BQ6UX53 244 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 GRIP2Q9C0E4 1043 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 RIBC2Q9H4K1 309 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 CDHR5Q9HBB8 845 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 CYP39A1Q9NYL5 469 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 WEE1P30291 646 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 AGAP11Q8TF27 550 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 KIAA1683Q9H0B3 1180 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 DUSP12Q9UNI6 340 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 E5RJQ4 531 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 H7C4K7 107 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 ZMPSTE24O75844 475 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 PIAS1O75925 651 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 ALDH9A1P49189 494 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 TUBP50607 506 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 NCKAP1LP55160 1127 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 PPIDQ08752 370 aaKnown RBP17.98■□□□□ 0.47
NPHP4-209ENST00000489180 DGKKQ5KSL6 1271 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 HDDC2Q7Z4H3 204 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 PACSIN3Q9UKS6 424 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 MYRFQ9Y2G1 1151 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 TMC7Q7Z402 723 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 SH3RF1Q7Z6J0 888 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 EPS8L2Q9H6S3 715 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 NMRAL1Q9HBL8 299 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 ZSCAN32Q9NX65 697 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 TRPC4Q9UBN4 977 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
NPHP4-209ENST00000489180 PPP3CAQ08209 521 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 MIIPQ5JXC2 388 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 SLC2A14Q8TDB8 520 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 PWWP2AQ96N64 755 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 BDH2Q9BUT1 245 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 SEC22BO75396 215 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 DDR2Q16832 855 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 VCPIP1Q96JH7 1222 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 ZNF184Q99676 751 aaPredicted RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 KLHL20Q9Y2M5 609 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 SH3BGRLO75368 114 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 LDLRP01130 860 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 CRABP2P29373 138 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 SLC25A3Q00325 362 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 ZNF284Q2VY69 593 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 LNX1Q8TBB1 728 aaPredicted RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 OSCP1Q8WVF1 389 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 CKAP2Q8WWK9 683 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 GANQ9H2C0 597 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 YWHAZP63104 245 aaKnown RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 KRR1Q13601 381 aaKnown RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 ERO1BQ86YB8 467 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 EID3Q8N140 333 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 C19orf18Q8NEA5 215 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 GLT1D1Q96MS3 346 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 REXO4Q9GZR2 422 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms