RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 C6orf222P0C671 652 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 RARBP10826 455 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 TPSB2P20231 275 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 CCNG1P51959 295 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 OCRLQ01968 901 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 BST2Q10589 180 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 DCAF4L1Q3SXM0 396 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ANO7Q6IWH7 933 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SLC27A1Q6PCB7 646 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ALKAL1Q6UXT8 129 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 C10orf107Q8IVU9 208 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 KBTBD2Q8IY47 623 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ANKRD52Q8NB46 1076 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 NPLOC4Q8TAT6 608 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ARNTL2Q8WYA1 636 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 FRMD8Q9BZ67 464 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 CYP4F11Q9HBI6 524 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PIGVQ9NUD9 493 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SIRPGQ9P1W8 387 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 IL1BP01584 269 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 USP4Q13107 963 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 MUM1Q2TAK8 710 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 FBXO47Q5MNV8 452 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 MAVSQ7Z434 540 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 MAB21L3Q8N8X9 362 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 USP33Q8TEY7 942 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 TFB1MQ8WVM0 346 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 OLFM3Q96PB7 478 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 DDX50Q9BQ39 737 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 TMEM216Q9P0N5 145 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 CPSF2Q9P2I0 782 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ATP9BO43861 1147 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PDE5AO76074 875 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 BPGMP07738 259 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 CYP2C9P11712 490 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 STX3Q13277 289 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SNX30Q5VWJ9 437 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 WSCD1Q658N2 575 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SPATA6LQ8N4H0 392 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 ENDOVQ8N8Q3 282 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 BEST2Q8NFU1 509 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 LPPQ93052 612 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 LRRC39Q96DD0 335 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 TTC1Q99614 292 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 PAAF1Q9BRP4 392 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 SNX25Q9H3E2 840 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.327e-9■■■■■ 34.7
CLIC4-202ENST00000488683 MOCS1Q9NZB8 636 aa13.04□□□□□ -0.32
CLIC4-202ENST00000488683 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
CLIC4-202ENST00000488683 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 DGKIO75912 1065 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 KRT38O76015 456 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 BCAT1P54687 386 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 PDE1BQ01064 536 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 WASHC2DQ5SRD0 308 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 UNC93AQ86WB7 457 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLIC4-202ENST00000488683 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 SCG3Q8WXD2 468 aaKnown RBP13.03□□□□□ -0.32
CLIC4-202ENST00000488683 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 YIPF3Q9GZM5 350 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 EME2A4GXA9 379 aaPredicted RBP13.03□□□□□ -0.32
CLIC4-202ENST00000488683 ZNF487B1APH4 448 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 PIRO00625 290 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 BAG2O95816 211 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 PRKCGP05129 697 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 SMIM10L2AP0DMW4 78 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 SMIM10L2BP0DMW5 78 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 CRYMQ14894 314 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 CERCAMQ5T4B2 595 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 PACS1Q6VY07 963 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 HASPINQ8TF76 798 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 SLC10A4Q96EP9 437 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 MFSD3Q96ES6 412 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 C7orf26Q96N11 449 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 PANX3Q96QZ0 392 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 GTF2IRD1Q9UHL9 959 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 DERAQ9Y315 318 aa13.03□□□□□ -0.32
CLIC4-202ENST00000488683 DPPA5A6NC42 116 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 PSMG1O95456 288 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 NR2C2P49116 596 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 RPL34P49207 117 aaKnown RBP13.02□□□□□ -0.32
CLIC4-202ENST00000488683 EPHB1P54762 984 aa13.02□□□□□ -0.32
CLIC4-202ENST00000488683 WASHC5Q12768 1159 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms