RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 BLMHQ13867 455 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 SPARCL1Q14515 664 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 TRIP6Q15654 476 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 ZACNQ401N2 412 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 MTX3Q5HYI7 312 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 PXDC1Q5TGL8 231 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 ZKSCAN2Q63HK3 967 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 RINT1Q6NUQ1 792 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 DENND1AQ8TEH3 1009 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 IPO4Q8TEX9 1081 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 PNISRQ8TF01 805 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 WDR12Q9GZL7 423 aaKnown RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 PRSS22Q9GZN4 317 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 SAP30LQ9HAJ7 183 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 BLMP54132 1417 aaPredicted RBP4.94□□□□□ -1.62
ITGB1-214ENST00000488427 SPATA31A5Q5VU36 1347 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 SPATA31A7Q8IWB4 1347 aa4.94□□□□□ -1.62
ITGB1-214ENST00000488427 ABCC1P33527 1531 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 GXYLT2A0PJZ3 443 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 F5H423 210 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-214ENST00000488427 SYT5O00445 386 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 ANXA6P08133 673 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 ITGA5P08648 1049 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 NHLRC4P0CG21 123 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-214ENST00000488427 MPGP29372 298 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 HOXD12P35452 270 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 VPS41P49754 854 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 PTK2BQ14289 1009 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 KRT72Q14CN4 511 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 TBRG1Q3YBR2 411 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 SLC9C1Q4G0N8 1177 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 COLEC12Q5KU26 742 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 LRCH2Q5VUJ6 765 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 ZNF66Q6ZN08 573 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 PIK3AP1Q6ZUJ8 805 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 UBE2Q1Q7Z7E8 422 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 TRABD2AQ86V40 505 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 REXO5Q96IC2 774 aaKnown RBP4.93□□□□□ -1.62
ITGB1-214ENST00000488427 CDCP1Q9H5V8 836 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 KCNK9Q9NPC2 374 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 ASNSD1Q9NWL6 643 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 TUBA8Q9NY65 449 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-214ENST00000488427 CDC23Q9UJX2 597 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 VPS4AQ9UN37 437 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 SCAF8Q9UPN6 1271 aaKnown RBP4.93□□□□□ -1.62
ITGB1-214ENST00000488427 PCDHB2Q9Y5E7 798 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 BRWD3Q6RI45 1802 aa4.93□□□□□ -1.62
ITGB1-214ENST00000488427 FNDC1Q4ZHG4 1894 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 MYO5CQ9NQX4 1742 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 CCDC187A0A096LP49 1063 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 hCG_1642624A0A1W2PR95 340 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SGPL1O95470 568 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ALDOAP04075 364 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ENO1P06733 434 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 TFEBP19484 476 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 NDUFS1P28331 727 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 AKT1P31749 480 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 RHBDL3P58872 404 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ID2Q02363 134 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 TLE3Q04726 772 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SLC14A1Q13336 389 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 KPNB1Q14974 876 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 PUM3Q15397 648 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ELF2Q15723 593 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 CEP78Q5JTW2 689 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 KLHL17Q6TDP4 642 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 RAB11FIP2Q7L804 512 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 DEFB132Q7Z7B7 95 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 MRPL10Q7Z7H8 261 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SPICE1Q8N0Z3 855 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 FAM47BQ8NA70 645 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ASB12Q8WXK4 309 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 DDB2Q92466 427 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SMG7Q92540 1137 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 PIGKQ92643 395 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 RPL36ALQ969Q0 106 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 EID2BQ96D98 161 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 P2RY11Q96G91 374 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ZNF845Q96IR2 970 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SLC29A3Q9BZD2 475 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 PRDM16Q9HAZ2 1276 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 CHST12Q9NRB3 414 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 TMLHEQ9NVH6 421 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 FNIP2Q9P278 1114 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SEMA5BQ9P283 1151 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 HERC5Q9UII4 1024 aaKnown RBP4.92□□□□□ -1.62
ITGB1-214ENST00000488427 DAAM1Q9Y4D1 1078 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 ZNF518AQ6AHZ1 1483 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 EMSYQ7Z589 1322 aa4.92□□□□□ -1.62
ITGB1-214ENST00000488427 SMIM35A0A1B0GVV1 85 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 KCNU1A8MYU2 1149 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 PCDH17O14917 1159 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 NKX2-8O15522 239 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 ASNA1O43681 348 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 BCAR3O75815 825 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 ATF7P17544 494 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-214ENST00000488427 PTGER1P34995 402 aa4.91□□□□□ -1.62
ITGB1-214ENST00000488427 ARHGAP25P42331 645 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms