RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 FAM155AB1AL88 458 aaPredicted RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 H0YJX3 145 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 TRAF5O00463 557 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 TRDMT1O14717 391 aaKnown RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 MTSS1O43312 755 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 PLA2G6O60733 806 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 KRT5P13647 590 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 GRIA3P42263 894 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 MTHFRP42898 656 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 BLVRAP53004 296 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 SSTP61278 116 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 SIM2Q14190 667 aaPredicted RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 DDR2Q16832 855 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 ANKRD40Q6AI12 368 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 RHBDF2Q6PJF5 856 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 DYMQ7RTS9 669 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 ZNF565Q8N9K5 539 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 LEMD2Q8NC56 503 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 PNMA1Q8ND90 353 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 OR5H6Q8NGV6 325 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 PYDC1Q8WXC3 89 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 SYN2Q92777 582 aaPredicted RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 RMDN3Q96TC7 470 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 CYTH2Q99418 400 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 MRPL39Q9NYK5 338 aaKnown RBP6.52□□□□□ -1.36
SIK3-212ENST00000488337 POLIQ9UNA4 740 aa6.52□□□□□ -1.36
SIK3-212ENST00000488337 FAM47DPA6NHR8 397 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 SNAPINO95295 136 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TGDSO95455 350 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DLDP09622 509 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 POLR2MP0CAP2 368 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DBTP11182 482 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 CASP3P42574 277 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 NLRP11P59045 1033 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 MYL6P60660 151 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 CHRNDQ07001 517 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 NFIAQ12857 509 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 BNIP3Q12983 259 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DHX34Q14147 1143 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 CLUL1Q15846 466 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 CLEC16AQ2KHT3 1053 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 C5orf22Q49AR2 442 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 Q5BKY6 102 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 KIAA1755Q5JYT7 1200 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 OR7E24Q6IFN5 339 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 GADL1Q6ZQY3 521 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 CCDC25Q86WR0 208 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 NT5DC4Q86YG4 428 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 ANKRD42Q8N9B4 389 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 JPH3Q8WXH2 748 aaPredicted RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 JADE3Q92613 823 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 GOLPH3Q9H4A6 298 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 MAGEF1Q9HAY2 307 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 RAVER2Q9HCJ3 691 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 RIMS3Q9UJD0 308 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 A0A1W2PPW3 197 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 H0YIN7 160 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 LAD1O00515 517 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 KRIT1O00522 736 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 KCNK3O14649 394 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DNAJB5O75953 348 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 CAPN1P07384 714 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 SYN1P17600 705 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 FGFR2P21802 821 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 FGFR4P22455 802 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DSG3P32926 999 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TECP42680 631 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 RPL21P46778 160 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 ALDH1A3P47895 512 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 EN1Q05925 392 aaPredicted RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 SNX17Q15036 470 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 VPS72Q15906 364 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 MAN2A1Q16706 1144 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 LRRC36Q1X8D7 754 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
SIK3-212ENST00000488337 ATF7IP2Q5U623 682 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 HID1Q8IV36 788 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 PAF1Q8N7H5 531 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 PIGBQ92521 554 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TRIM63Q969Q1 353 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 RHOBTB2Q9BYZ6 727 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 Q9H521 79 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TMEM9Q9P0T7 183 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TMEM5Q9Y2B1 443 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 DTNAQ9Y4J8 743 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 ZNF98A6NK75 572 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 EVPLLA8MZ36 301 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TAF4O00268 1085 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 CTDSP2O14595 271 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 TYROBPO43914 113 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 EPN2O95208 641 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 BAG2O95816 211 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 CD4P01730 458 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 KRT18P05783 430 aaKnown RBP6.52□□□□□ -1.37
SIK3-212ENST00000488337 OR52Z1P0C646 297 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 GCAP28676 217 aa6.52□□□□□ -1.37
SIK3-212ENST00000488337 NAMPTP43490 491 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms