RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 C7orf26Q96N11 449 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZNF641Q96N77 438 aaPredicted RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DOK1Q99704 481 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 CCDC106Q9BWC9 280 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DCLK3Q9C098 648 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 MANSC1Q9H8J5 431 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 DNAJC17Q9NVM6 304 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 GID8Q9NWU2 228 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 TRNAU1APQ9NX07 287 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 NCKIPSDQ9NZQ3 722 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ASIC3Q9UHC3 531 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ANAPC5Q9UJX4 755 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 PTPN22Q9Y2R2 807 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 AP4B1Q9Y6B7 739 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 RBBP6Q7Z6E9 1792 aaKnown RBP4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 RGPD5Q99666 1765 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 ATRNL1Q5VV63 1379 aa4.91□□□□□ -1.62
CDC42BPA-213ENST00000488131 MAST2Q6P0Q8 1798 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MYH14Q7Z406 1995 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CICQ96RK0 1608 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ANKRD34BA5PLL1 514 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CAPN8A6NHC0 703 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 TTC34A8MYJ7 566 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ERVV-2B6SEH9 535 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 KLRF2D3W0D1 207 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 TXNDC9O14530 226 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PFDN6O15212 129 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 KMOO15229 486 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 SLC26A4O43511 780 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 TIMM44O43615 452 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 TOM1O60784 492 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 RNGTTO60942 597 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 LRRN2O75325 713 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 FAM155BO75949 473 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 BMP10O95393 424 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 WNT11O96014 354 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 POLR2MP0CAP2 368 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 SRGAP2CP0DJJ0 459 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 SRGAP2BP0DMP2 458 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MYL2P10916 166 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 VEGFAP15692 232 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 RAG1P15918 1043 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PIK3CAP42336 1068 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ETV4P43268 484 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MAGEA4P43358 317 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ALDH1A3P47895 512 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ATP6V0D1P61421 351 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZNF200P98182 395 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MECOMQ03112 1051 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 NR1D2Q14995 579 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ANKDD1AQ495B1 522 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 SGO2Q562F6 1265 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 C6orf183Q5T699 404 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 FAAH2Q6GMR7 532 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZNF280DQ6N043 979 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZNF804AQ7Z570 1209 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PRUNE1Q86TP1 453 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ITIH5Q86UX2 942 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 GPR180Q86V85 440 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CHERPQ8IWX8 916 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 C4orf33Q8N1A6 199 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PQLC1Q8N2U9 271 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CPSF7Q8N684 471 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ATP6V0D2Q8N8Y2 350 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 BANPQ8N9N5 519 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MINDY2Q8NBR6 621 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 GSTCDQ8NEC7 633 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ADCY4Q8NFM4 1077 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 HM13Q8TCT9 377 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ACTRT2Q8TDY3 377 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 USP33Q8TEY7 942 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PPP1R13LQ8WUF5 828 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PYDC1Q8WXC3 89 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PSPC1Q8WXF1 523 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CLPTM1LQ96KA5 538 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MTMR9Q96QG7 549 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 RBM15Q96T37 977 aaKnown RBP eCLIP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PRPF18Q99633 342 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 THTPAQ9BU02 230 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 NDEL1Q9GZM8 345 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 WWP1Q9H0M0 922 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 THAP2Q9H0W7 228 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 MAN1C1Q9NR34 630 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CNOT11Q9UKZ1 510 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 PSMD13Q9UNM6 376 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 DNM3Q9UQ16 869 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ERVK-11Q9UQG0 969 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ITM2BQ9Y287 266 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ZNF652Q9Y2D9 606 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 RABGAP1Q9Y3P9 1069 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 N6AMT1Q9Y5N5 214 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 SCN4AP35499 1836 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 CACNA1SQ13698 1873 aa4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 ASTN2O75129 1339 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-213ENST00000488131 DYNC1LI2O43237 492 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 XPOTO43592 962 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 PRKAB2O43741 272 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms