RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CYSRT1A8MQ03 144 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 RHODO00212 210 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 PPP6R2O75170 966 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 SGPL1O95470 568 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 TGFB3P10600 412 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 MYL4P12829 197 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 PRIM2P49643 509 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 CASP5P51878 434 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 SLC37A1P57057 533 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 ASIC2Q16515 512 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 SLC5A9Q2M3M2 681 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 TRILQ7L0X0 811 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 SPATA2LQ8IUW3 424 aaPredicted RBP4.82□□□□□ -1.64
SMC4-219ENST00000487747 EXD3Q8N9H8 876 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 GLIS1Q8NBF1 620 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 NUDCD2Q8WVJ2 157 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 MCRS1Q96EZ8 462 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 EIF3CQ99613 913 aaKnown RBP4.82□□□□□ -1.64
SMC4-219ENST00000487747 NTPCRQ9BSD7 190 aaKnown RBP4.82□□□□□ -1.64
SMC4-219ENST00000487747 DDX21Q9NR30 783 aaKnown RBP eCLIP4.82□□□□□ -1.641e-26■■■■■ 198.7
SMC4-219ENST00000487747 ZNF112Q9UJU3 913 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 MAN2B2Q9Y2E5 1009 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 PCDHB7Q9Y5E2 793 aa4.82□□□□□ -1.64
SMC4-219ENST00000487747 NPC1O15118 1278 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 CNTN5O94779 1100 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 IFNA2P01563 188 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 PEPDP12955 493 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 EGR1P18146 543 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 LTBQ06643 244 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 GLE1Q53GS7 698 aaKnown RBP4.81□□□□□ -1.64
SMC4-219ENST00000487747 ISM2Q6H9L7 571 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 CTU1Q7Z7A3 348 aaKnown RBP4.81□□□□□ -1.64
SMC4-219ENST00000487747 IQCF1Q8N6M8 205 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 CCDC150Q8NCX0 1101 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 OR52N4Q8NGI2 321 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 LPAR1Q92633 364 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 FAM84BQ96KN1 310 aaPredicted RBP4.81□□□□□ -1.64
SMC4-219ENST00000487747 ABHD14AQ9BUJ0 271 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 HTATIP2Q9BUP3 242 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 MAP6D1Q9H9H5 199 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 PRDM16Q9HAZ2 1276 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 ERVK-5Q9HDB9 667 aa4.81□□□□□ -1.64
SMC4-219ENST00000487747 SIRT3Q9NTG7 399 aaPredicted RBP4.81□□□□□ -1.64
SMC4-219ENST00000487747 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMC4-219ENST00000487747 DPPA5A6NC42 116 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 TAF5LO75529 589 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 VIPP01282 170 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 ACAA1P09110 424 aaPredicted RBP4.8□□□□□ -1.64
SMC4-219ENST00000487747 SLC5A1P13866 664 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 ATF3P18847 181 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 SHC2P98077 582 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 HYAL1Q12794 435 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
SMC4-219ENST00000487747 WASHC2DQ5SRD0 308 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 USP17L6PQ6QN14 398 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 LRIG3Q6UXM1 1119 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 FAM47BQ8NA70 645 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 ATP2A3Q93084 1043 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 SNX27Q96L92 541 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 MEIS3Q99687 375 aa4.8□□□□□ -1.64
SMC4-219ENST00000487747 RPS10-NUDT3A0A1W2PQS6 291 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 EME2A4GXA9 379 aaPredicted RBP4.79□□□□□ -1.64
SMC4-219ENST00000487747 J3KTA2 159 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 M0QYT0 321 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 APOL1O14791 398 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 MDM4O15151 490 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 SRGAP2BP0DMP2 458 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 MLH1P40692 756 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 STT3AP46977 705 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 SLC4A8Q2Y0W8 1093 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 CAPRIN2Q6IMN6 1127 aaKnown RBP4.79□□□□□ -1.64
SMC4-219ENST00000487747 USP43Q70EL4 1123 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 BEND5Q7L4P6 421 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 KRT27Q7Z3Y8 459 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.79□□□□□ -1.64
SMC4-219ENST00000487747 RBM23Q86U06 439 aaKnown RBP4.79□□□□□ -1.64
SMC4-219ENST00000487747 ADGRF3Q8IZF5 1079 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 SLC22A17Q8WUG5 538 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 MED30Q96HR3 178 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 URB1-AS1Q96HZ7 61 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 TBCBQ99426 244 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 NUDT22Q9BRQ3 303 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 MAGEH1Q9H213 219 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 RGL1Q9NZL6 768 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 SELENONQ9NZV5 590 aa4.79□□□□□ -1.64
SMC4-219ENST00000487747 FAM234BA2RU67 622 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 BECN2A8MW95 431 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 FOXO6A8MYZ6 492 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 NFATC1O95644 943 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 ITGA5P08648 1049 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 RFX2P48378 723 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 RFX5P48382 616 aaPredicted RBP4.78□□□□□ -1.64
SMC4-219ENST00000487747 NFATC4Q14934 902 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 ZNF628Q5EBL2 1059 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 WDR75Q8IWA0 830 aaKnown RBP4.78□□□□□ -1.64
SMC4-219ENST00000487747 PAQR4Q8N4S7 273 aaPredicted RBP4.78□□□□□ -1.64
SMC4-219ENST00000487747 C7orf57Q8NEG2 295 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 CENPIQ92674 756 aaPredicted RBP4.78□□□□□ -1.64
SMC4-219ENST00000487747 SF3B5Q9BWJ5 86 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms