RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 UBE2Q2Q8WVN8 375 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 TEKT4Q8WW24 435 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 XPO6Q96QU8 1125 aaKnown RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 HEBP1Q9NRV9 189 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 PPARGC1AQ9UBK2 798 aaKnown RBP13.76□□□□□ -0.21
COL4A6-207ENST00000487645 FBXO10Q9UK96 956 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 FBXL21Q9UKT6 434 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 PPP2R2CQ9Y2T4 447 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 ALG6Q9Y672 507 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 PIAS3Q9Y6X2 628 aa13.76□□□□□ -0.21
COL4A6-207ENST00000487645 MYO18AQ92614 2054 aaKnown RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 TYW5A2RUC4 315 aaKnown RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 TMEM110-MUSTN1A8MSY1 372 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 E9PAM4 449 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 NEDD8-MDP1E9PL57 170 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 SPECC1L-ADORA2AF8WAN1 911 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 TRDMT1O14717 391 aaKnown RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 CACNG3O60359 315 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 TBL1XO60907 577 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 KRT7P08729 469 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 CTHP32929 405 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 HTR7P34969 479 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 SSR1P43307 286 aaKnown RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 ZNF135P52742 658 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 VCPP55072 806 aaKnown RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 STARD6P59095 220 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 SLC25A11Q02978 314 aaKnown RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 SIGLEC14Q08ET2 396 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 ARTNQ5T4W7 220 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 LRRC38Q5VT99 294 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 C11orf63Q6NUN7 778 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 POLNQ7Z5Q5 900 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 ETFBKMTQ8IXQ9 262 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 ZNF557Q8N988 423 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-207ENST00000487645 TTC8Q8TAM2 541 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 KIAA1524Q8TCG1 905 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 PEBP4Q96S96 227 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 VANGL2Q9ULK5 521 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 AP4E1Q9UPM8 1137 aa13.75□□□□□ -0.21
COL4A6-207ENST00000487645 CHD5Q8TDI0 1954 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 A0A0A0MRY4 1105 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 ZSCAN12O43309 604 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 BUB1O43683 1085 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 RARAP10276 462 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 COMTP21964 271 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 IL1R2P27930 398 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 HOXD9P28356 352 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 HCAR3P49019 387 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 RPS24P62847 133 aaKnown RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 SEMA3BQ13214 749 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 IER5LQ5T953 404 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 MANEALQ5VSG8 457 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 DAB2IPQ5VWQ8 1189 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 ZNF852Q6ZMS4 543 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 DAAM2Q86T65 1068 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 SUGP1Q8IWZ8 645 aaKnown RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 CFAP52Q8N1V2 620 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 ATRIPQ8WXE1 791 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 IGSF8Q969P0 613 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 MYEOVQ96EZ4 313 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 PRICKLE1Q96MT3 831 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 RPRD1AQ96P16 312 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 NELL2Q99435 816 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 ARHGEF3Q9NR81 526 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 PLK2Q9NYY3 685 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 TRIM10Q9UDY6 481 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 CA14Q9ULX7 337 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 GUCA1BQ9UMX6 200 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 MRPS17Q9Y2R5 130 aaKnown RBP13.74□□□□□ -0.21
COL4A6-207ENST00000487645 SNX10Q9Y5X0 201 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
COL4A6-207ENST00000487645 ATG2BQ96BY7 2078 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 A0A1B0GVM2 712 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 MACROD2A1Z1Q3 448 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 KRBA1A5PL33 1030 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 TCAF2A6NFQ2 919 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 TNFRSF10AO00220 468 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SPOPO43791 374 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SRGAP2O75044 1071 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 TULP3O75386 442 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CLDN11O75508 207 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CISD3P0C7P0 127 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 TCF4P15884 667 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 OPRD1P41143 372 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SOX9P48436 509 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 GALK1P51570 392 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 SGSHP51688 502 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 CDH4P55283 916 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 TAS2R40P59535 323 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 DPYSL2Q16555 572 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
COL4A6-207ENST00000487645 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms