RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 CDH18Q13634 790 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 BEND5Q7L4P6 421 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 KIAA0907Q7Z7F0 614 aaPredicted RBP24.48■■□□□ 1.51
PLOD3-215ENST00000487563 FAM124AQ86V42 546 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 CARNMT1Q8N4J0 409 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 MINDY1Q8N5J2 469 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 NUP58Q9BVL2 599 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 LHX5Q9H2C1 402 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 TMEM245Q9H330 911 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 POPDC2Q9HBU9 364 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 CYTH4Q9UIA0 394 aa24.48■■□□□ 1.51
PLOD3-215ENST00000487563 GTPBP10A4D1E9 387 aaKnown RBP24.47■■□□□ 1.51
PLOD3-215ENST00000487563 BECN2A8MW95 431 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 RPS24P62847 133 aaKnown RBP24.47■■□□□ 1.51
PLOD3-215ENST00000487563 YWHAZP63104 245 aaKnown RBP24.47■■□□□ 1.51
PLOD3-215ENST00000487563 SHC2P98077 582 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 APBA1Q02410 837 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 SYPL2Q5VXT5 272 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 TMEM110Q86TL2 294 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 FAM114A1Q8IWE2 563 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 CADM4Q8NFZ8 388 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 SLC39A13Q96H72 371 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 NUCKS1Q9H1E3 243 aaKnown RBP24.47■■□□□ 1.51
PLOD3-215ENST00000487563 MIR1-1HGQ9H1L0 117 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 CLSTN2Q9H4D0 955 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 THAP9Q9H5L6 903 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 FBRSQ9HAH7 460 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 ADAMTS9Q9P2N4 1935 aa24.47■■□□□ 1.51
PLOD3-215ENST00000487563 MUC22E2RYF6 1773 aaPredicted RBP24.47■■□□□ 1.51
PLOD3-215ENST00000487563 ST8SIA6P61647 398 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 FOXC1Q12948 553 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 PTPRNQ16849 979 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 MS4A13Q5J8X5 152 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 DCAF12L1Q5VU92 463 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 CHSY1Q86X52 802 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 IRF2BP1Q8IU81 584 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 PASD1Q8IV76 773 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 FIBINQ8TAL6 211 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 SHC3Q92529 594 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 FAM204AQ9H8W3 233 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 TJP2Q9UDY2 1190 aa24.46■■□□□ 1.51
PLOD3-215ENST00000487563 ASCC3Q8N3C0 2202 aaKnown RBP24.45■■□□□ 1.5
PLOD3-215ENST00000487563 TRUB2O95900 331 aaKnown RBP24.45■■□□□ 1.5
PLOD3-215ENST00000487563 IGLV3-19P01714 112 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 PON1P27169 355 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 PTK2Q05397 1052 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 MAN2A1Q16706 1144 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 ZC3H12AQ5D1E8 599 aaKnown RBP24.45■■□□□ 1.5
PLOD3-215ENST00000487563 LGI2Q8N0V4 545 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 CFAP52Q8N1V2 620 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 ZCCHC9Q8N567 271 aaKnown RBP24.45■■□□□ 1.5
PLOD3-215ENST00000487563 OR2I1PQ8NGU4 316 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 NOX5Q96PH1 765 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 SUN2Q9UH99 717 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 DACH1Q9UI36 760 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 NFE2L3Q9Y4A8 694 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 PCDH15Q96QU1 1955 aa24.45■■□□□ 1.5
PLOD3-215ENST00000487563 A0A1B0GTW7 788 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 DNTTP04053 509 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 ASLP04424 464 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 SEMA3BQ13214 749 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 ST3GAL2Q16842 350 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 TTC31Q49AM3 519 aaPredicted RBP24.44■■□□□ 1.5
PLOD3-215ENST00000487563 DCAF6Q58WW2 860 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 RAP1GAP2Q684P5 730 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 ATP6V0D2Q8N8Y2 350 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 DNASE2BQ8WZ79 361 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 SNX19Q92543 992 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 MYEOVQ96EZ4 313 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 PPP1R13BQ96KQ4 1090 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 BTN2A3PQ96KV6 586 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 PRSS16Q9NQE7 514 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 SLC12A6Q9UHW9 1150 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 XPO7Q9UIA9 1087 aaKnown RBP24.44■■□□□ 1.5
PLOD3-215ENST00000487563 CEP83Q9Y592 693 aa24.44■■□□□ 1.5
PLOD3-215ENST00000487563 METTL12A8MUP2 240 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 H0Y626 953 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 LUC7L3O95232 432 aaKnown RBP24.43■■□□□ 1.5
PLOD3-215ENST00000487563 MOCS3O95396 460 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 PRKCSHP14314 528 aaPredicted RBP24.43■■□□□ 1.5
PLOD3-215ENST00000487563 CSKP41240 450 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 CDK17Q00537 523 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 RNF34Q969K3 372 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 CPXM1Q96SM3 734 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 NUP62CLQ9H1M0 184 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 PCED1AQ9H1Q7 454 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 DNAJC12Q9UKB3 198 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 CHD8Q9HCK8 2581 aa24.43■■□□□ 1.5
PLOD3-215ENST00000487563 SYNJ2BP-COX16A0A087WUM0 186 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 F5H5T6 163 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 PES1O00541 588 aaKnown RBP24.42■■□□□ 1.5
PLOD3-215ENST00000487563 TACR2P21452 398 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 KRT9P35527 623 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 SNX16P57768 344 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 RPS14P62263 151 aaKnown RBP24.42■■□□□ 1.5
PLOD3-215ENST00000487563 ZBTB16Q05516 673 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 GRIK2Q13002 908 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 TAF5Q15542 800 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 DPCR1Q3MIW9 517 aa24.42■■□□□ 1.5
PLOD3-215ENST00000487563 EFHC1Q5JVL4 640 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms